DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad89D and cdhr2

DIOPT Version :9

Sequence 1:NP_650554.3 Gene:Cad89D / 42006 FlyBaseID:FBgn0038439 Length:2240 Species:Drosophila melanogaster
Sequence 2:XP_031754706.1 Gene:cdhr2 / 100491782 XenbaseID:XB-GENE-1004777 Length:1320 Species:Xenopus tropicalis


Alignment Length:1671 Identity:338/1671 - (20%)
Similarity:612/1671 - (36%) Gaps:512/1671 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   514 VEITLLDTNDNTPKFEHGNLYEFKVPINAPTGYVIGQVVAHDPDEGPNGHLLYELQRPKGSGYIP 578
            |.:..:.:.:..|:|. .|:....:|.:.|.|..:..:||.|.|..|   |.|.::   |.....
 Frog    18 VFMVTVSSQNTAPEFA-SNMTSAFIPEDTPLGKCVFWIVARDADNDP---LTYSME---GQDSYY 75

  Fly   579 FRLDNKNGTIYVGGPL---RRGRIAVFVEATDQPTNPSERRFSLAVITIEVYATIDDQAIDFVGA 640
            |.::...|.:.:..||   .:.::...::..|:...|..|:|.:.|      ...:|....|:|.
 Frog    76 FNVNLMTGEVQLALPLDYESKNKLNTMIKVQDEINRPVIRQFPVIV------EDRNDNDPVFLGI 134

  Fly   641 PYEFWVGANTPLGTSVGQVRTTLIYEGGDEIMYDLLHTYSEGVPFAIEER-------SGIITVIR 698
            |||..:..:.|||:.|..|...   :..|:....:.::..|.:|..::..       :|.| ::.
 Frog   135 PYEASIREDQPLGSIVFSVSAV---DFDDDGRVPVTYSIDEIIPNDLQSNNLFYILLNGSI-ILN 195

  Fly   699 ELSEFKRKVYQFEAVANY-----LFANSSQSLVMSRSSSPLTTIASPAELSDEGVLITNLTIHIV 758
            :...:..|...::...|.     ||.|.    .|.||:                  :..:::.::
 Frog   196 DTLNYNEKSIFYQMTINATDKGGLFHNH----FMYRST------------------LAYVSLKVI 238

  Fly   759 NKPEQKVPLRPVIEEINMNVIHFHVEENV-VGGIIGQLLYKNGINLVNNELGTYREMPSEPTSRN 822
            :.|:    |.|.......:|   .:|||: :|..|.::...:|...:|:|:              
 Frog   239 DLPD----LDPQFINAPYSV---SIEENIALGTTIFRVTAIDGDRGINDEI-------------- 282

  Fly   823 ITMGSRFRSRNRSRSSKSKRRLPRRLVGDANIKLRYIIANQQEVVNKISITEDGTLLTLTGLDRE 887
                 ::..::.||..          :.|.|.|...|....:  :::.::.:||..:.||.:.:|
 Frog   283 -----QYSIQDSSRHG----------LFDINSKSGEIFVTAK--IDREALVQDGEQVLLTVMAQE 330

  Fly   888 QQPSYELTVIVEYSTGLVSGAGIYQVNIKVDDVNDNAPKF-------------NALTYVGLINEN 939
            :    .|.|..|.:|...:      |.::|.|:|||.|.|             ..|:::|.|.|:
 Frog   331 K----NLNVNAEKATSTTT------VTVRVLDINDNKPNFYNCEIDDCDFSAAPTLSFLGEIEEH 385

  Fly   940 CVVGTELSMNHAILIQDADEGPNAEFRVQLQGDYSDEFSIEYVNGTSSENSTHHKMPSTTGAFNI 1004
            ..:...:: ...|...|.|:..|..|.:.|:|...|.|::.               |:       
 Frog   386 SSIRVPVA-KLKITGHDPDKDKNGNFNLYLRGKDQDCFTVS---------------PA------- 427

  Fly  1005 FNLTDQWNDEFKYQELHTTFMQTNFKLSSGPYFRISYTG--------KRGLDREKQQLYNLKIIA 1061
                                             |:..||        ...:|.||.....::|:|
 Frog   428 ---------------------------------RVQNTGLIQVLVKDSVAIDYEKVHQMEVEIVA 459

  Fly  1062 ADTG--GLSGYAHLTVLVADVNDNAPMFERISVFKDSRLEIREYTTDMEIYFVESSSGMTAPQAT 1124
            .|||  ....||.:|:.:.|:||:.|.|.:                  :.|::|           
 Frog   460 NDTGLQDCCSYATVTIDIIDINDHTPEFSQ------------------DTYYLE----------- 495

  Fly  1125 AAMMLAPPPYHIPGSPRFNVDRERSVGAGLGVVARAKSRRRMVRALTTKCPLFAIYEDTPVGTKV 1189
                                                                  :.|:.|.||::
 Frog   496 ------------------------------------------------------VMENCPDGTQI 506

  Fly  1190 LQLSASDEDFGKNALLHYELQGEQVERTPGMPMLRVHGVKYFAIDKLSGE-LSVN-YPLSANIEI 1252
            ..::|:|.|.|:...:.|:|..|.:.             :.|.:|..||| ::|| ..|......
 Frog   507 GTITATDLDSGELGKITYQLLPESIR-------------QIFHVDSDSGEIIAVNGNLLDRERRS 558

  Fly  1253 MLNLTVTDIDGLK--DSTCLRFTVMDVNNHAPTFKKSWYSFDTPEGEYKDSVLGQLTAIDMD--F 1313
            :...|:...|||.  .:..|..|::|.|:..||...|:..|   ..|..|.|..|:.|.|.|  .
 Frog   559 LYYATLQAADGLNATGTALLEITILDENDEIPTAIGSYNIF---VNENTDDVRIQIEAFDADEPN 620

  Fly  1314 GENANITYTLSDSHLP--FTIKPASGVLKIGGQLDRELKDKYSFQVIATDNAPV----------M 1366
            ..|:.|.:.|..|.|.  |::...:|::...|.||||..|:       .||..:          :
 Frog   621 TNNSRIEFELLPSVLSSNFSVNVTTGLITSIGPLDREAIDE-------KDNGCIVLTVKLYDLGV 678

  Fly  1367 QRMSSSVDVEVNVLDINDNRPEFIGYDDQTKAVKFIPSVADRTLMLPVYKAYLDRST---QPGTF 1428
            ..:||.|:|.:||.|:|||.|.|                 .:|    ||..:::.||   |.|. 
 Frog   679 PSLSSEVNVTINVEDLNDNVPVF-----------------SKT----VYDFFVNESTIAAQVGI- 721

  Fly  1429 VRQLTAIDKDNV-------------GNGNGLVLYSIRHQEMQAPLFQ-IDSRDGTISTISRINGY 1479
               |...|:|..             |:||    :.||:|::::.|:. |.|.|..:..       
 Frog   722 ---LLVSDQDQTELNNRVSFRISQGGSGN----FIIRNQKVESGLYNGILSLDPDVML------- 772

  Fly  1480 NDYE-HLNVSVI--ASDVGSPALSATAIVIVNLQGQAVTDPPKSTPKPEPPA--NVTVFQHAYYE 1539
             ||| ..|.::|  |.|.|...:|.||....::|...:.|.|   |..:|.:  |:.:.::....
 Frog   773 -DYETQKNYTLIIEAQDNGLHGVSHTATATASVQVLDLNDEP---PYVDPSSLNNLFLLENRTVG 833

  Fly  1540 VKLTENNEA-------PIEVMRLNLSAGLNPEN-----YRWSLWL----EEGLDETDAHPPFEYD 1588
            ::|....:|       .:|...|:|....|..:     |.| :||    |..:::|:.   .:|:
 Frog   834 LELLTTLKAHDPDTIHELEFQALSLQCFKNGNDIGNICYDW-IWLAPNGELFVNDTEV---VDYE 894

  Fly  1589 AKNMLLYALKPFDREHISRYQLRIRADRLSREARNYARVSYPVVDERIEGLSLNECRILVHIADE 1653
            ..::::..|:..|:       |.:..||.|:                      || .:.|.|.|.
 Frog   895 LCDVMVMMLRVEDK-------LTLIGDRYSK----------------------NE-SLRVDILDV 929

  Fly  1654 NDNAPKFRGNGQPIVAVLPQSASFGYPVTRVEANDLDEGLNAEIRYR--------------LLNE 1704
            |||||:|. :...:..|:|..|...|.|..|:|.|.|.||||.:::.              ||| 
 Frog   930 NDNAPEFL-DVDEVFVVVPDVAPIDYQVALVKATDKDSGLNAVLKFSIASVEFISGDSTRPLLN- 992

  Fly  1705 PARLFGIDELS------GNIRLLGELSRT-EHIYGFDVKATDRMGADDGRSGIVNVFVYIINEAK 1762
               :|.|...|      |:||:...|..| :..|...|.|.|........:.::::|.  ::|:.
 Frog   993 ---IFTIVTTSEKEIYQGSIRVASSLDATLKGNYRVTVIAEDSGNPSLTATRVLDIFA--VDESY 1052

  Fly  1763 QVRLVVAGMPVEVERRIEGLMEALSDAIGKDV---RVRLLEPYSGGLEPATNA-------YIY-- 1815
            :|.|..:....||....|.:..||:.|....|   :::.|||.|..:....:|       ::|  
 Frog  1053 RVTLKFSKTADEVRETSEEIKRALTMATKATVYVAQIKDLEPSSKMIIQRASAECIMSVYFVYNN 1117

  Fly  1816 --AVDPHTNSIMEMEQLQDALAGLQLDALQLQQQKLDGGKPMPRILELAEFGQLARPAHASASSF 1878
              |:.|.     |:|::..:.:....:.|||....:.||..:.:......:|.:|..|.|     
 Frog  1118 GTAITPE-----ELERILQSDSAALAELLQLGLFVIGGGAGINKKANEILYGVIAGLAGA----- 1172

  Fly  1879 MGGLEFVTVVLLALISLGALIAACCYVCMRQ--KRRLWSQRDFSASDAGLTYTIAGIGSPRGQKQ 1941
                    :||:.:|.:.||      ||:|:  ||:|.:.:....:.......:.|:.:..|   
 Frog  1173 --------LVLILIIMIIAL------VCVRKSHKRQLRAVKALKVAKTLPVEMVQGVEAIPG--- 1220

  Fly  1942 RRQRQQRHTQRCSKGSTGSQRP-----TSAFMPESVCSSAQTQSTATATEKLEQQLHHHHQQQAM 2001
                       .:|.::....|     .:..:......|:....:|:.....:..|..:..|.::
 Frog  1221 -----------TNKFNSDGANPMLNLDVNPILDLGFEESSSFSDSASVNSLDDNMLARNGGQSSV 1274

  Fly  2002 ATQQQHHQYLN--EQQRQQKREYIDVPLPKSIAKAAAVTSGGDGAV 2045
            ..:.|....|:  ::..:.|.|    ||..::: ..|.||..:||:
 Frog  1275 PQESQDMSVLSGTDEDSRAKEE----PLAAALS-GRAQTSYSNGAL 1315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad89DNP_650554.3 Cadherin_repeat 183..290 CDD:206637
Cadherin_repeat 325..407 CDD:206637
Cadherin_repeat 416..524 CDD:206637 1/9 (11%)
Cadherin_repeat 534..626 CDD:206637 20/94 (21%)
Cadherin_repeat 641..>714 CDD:206637 14/79 (18%)
CA 851..925 CDD:214520 19/73 (26%)
CA 1026..1085 CDD:214520 17/68 (25%)
Cadherin_repeat 1177..1280 CDD:206637 27/106 (25%)
Cadherin_repeat 1289..1385 CDD:206637 31/109 (28%)
Cadherin_repeat 1414..1510 CDD:206637 30/115 (26%)
CA 1576..1658 CDD:214520 16/81 (20%)
Cadherin_repeat 1666..1760 CDD:206637 29/114 (25%)
cdhr2XP_031754706.1 Cadherin_repeat 38..127 CDD:206637 20/100 (20%)
Cadherin_repeat 135..242 CDD:206637 21/132 (16%)
Cadherin_repeat 251..>332 CDD:206637 20/118 (17%)
Cadherin_repeat 381..483 CDD:206637 28/157 (18%)
Cadherin_repeat 491..587 CDD:206637 28/173 (16%)
Cadherin_repeat 595..697 CDD:206637 32/111 (29%)
Cadherin_repeat 705..811 CDD:206637 31/121 (26%)
Cadherin_repeat 941..1045 CDD:206637 28/107 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11522
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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