DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad89D and dchs1a

DIOPT Version :9

Sequence 1:NP_650554.3 Gene:Cad89D / 42006 FlyBaseID:FBgn0038439 Length:2240 Species:Drosophila melanogaster
Sequence 2:XP_002664697.2 Gene:dchs1a / 100334632 ZFINID:ZDB-GENE-120410-3 Length:3275 Species:Danio rerio


Alignment Length:2326 Identity:527/2326 - (22%)
Similarity:806/2326 - (34%) Gaps:722/2326 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 YPRSTAALK---------------GADASGDH--------------KYFNLTEHNATTLVVSLAR 129
            :||..|..|               ..||..|.              :.|.|.....:..|:.|..
Zfish   139 FPRKRATFKIPEQTTIGTKFPLEPAVDADEDQLTTQGYIITDGNVGQAFLLETKRGSNKVLYLDL 203

  Fly   130 SLERLVDRDVPRNLLKFRILCAGKQEKLEEGS-----YLSITVYIEDVNDNAPEFLNVPYVVDVD 189
            .:..::||:...:   :.:|.    |..:.||     .:.:.|.::|:|||||.|....|...:.
Zfish   204 VVNAVLDRETRSS---YTLLL----EAFDGGSPKRTGQMILDVIVQDINDNAPVFNQSRYHAMIS 261

  Fly   190 ENTSIESIIFEGVQAFDRD----------------------------------KP---------- 210
            ||....:.|.: |.|.|.|                                  ||          
Zfish   262 ENLQPGNNILQ-VFASDADEGDNGLVLYDINRRQSDPDHYFVIDSRTGVITLNKPLDYEMRRVHE 325

  Fly   211 -------NTPNSEVHFSMSTVPEQ-------------LSADGSP----------YFALKSPHRP- 244
                   |....||..|..|:..:             ||.||||          |.|..|...| 
Zfish   326 LVVQARDNASQPEVTNSFVTIQVRDYNDNQPTMTIIFLSEDGSPRISEGAQPGQYVARISVTDPD 390

  Fly   245 ----------------------------LLILKRELDFDNGIRQFKLPIFAWDRGTPANQANTTI 281
                                        |:.:.:.||.:.. ..::|.:.|.|.|||..:|.::.
Zfish   391 YGEYANVNVSLEGGNGKFALTTKDSIIYLICVDQILDREEQ-DHYELRVMATDSGTPPLRAESSF 454

  Fly   282 TINVRDVDDLPPKFTEGVYRTRINEFYPMTGVPIRIPLYFAPPIMAFDQD-SLNASLVYDII--S 343
            ||.|.||:|.||.|.:..|...|.|        :..|..|...:.|.|:| ..|..:.|.|:  .
Zfish   455 TIQVIDVNDNPPLFDQQEYTQVIPE--------VAFPGSFVVQVTARDKDQGPNGDVQYSILQNE 511

  Fly   344 GNERQLFRVNPHNGVMYLQKEIDLEEESLPGNTFVLQLEARQKDNPLKKALARIEVEVLDLNDNV 408
            |.....|.|:...||:....::|.|.:..|..|.|    |..:..|...:.|.::|.:.|:|||.
Zfish   512 GTHSDWFSVDAVTGVVTTLTQLDYEIDPTPSITVV----ASDRGRPPLSSTAVVKVILQDINDNE 572

  Fly   409 PEFEADYYNISIVENLPTGFSVLQVNAVDRDQGENSEFLYNLVETKDAA--GAFRIDSRTGWITV 471
            |.|.:.:||.||.||.|.....::|.|.|.|.|......|:|...:.:.  ..|.:|...|.|..
Zfish   573 PVFGSKFYNASIKENAPARTCFMEVTATDADGGSFGSISYSLGSGQGSVTPSQFTVDKHNGQICT 637

  Fly   472 RDDRLLDREQ-RRSIQLNVEALERNPSYLDDKHLKKPGPSKV-QVEITLLDTNDNTPKFEHGNLY 534
            ...  |||:| ..:....|.|::..            |.|.| .|.:.|:|.|||.|.| :...|
Zfish   638 TTS--LDRDQGPANYDFTVTAVDGG------------GLSSVAYVRVDLIDINDNQPAF-YPVSY 687

  Fly   535 EFKVPINAPTGYVIGQVVAHDPDEGPNGHLLYELQRPKGSGYIPFRLDNKN-GTIYVGGPLRRGR 598
            ...:...:..|..:.:|.|||||...||.:.|... |:||.  ||...||: |.|.:...| .|:
Zfish   688 AVSLSTQSAPGTSVLKVTAHDPDAAENGRVTYRTV-PEGSS--PFFTLNKDTGVISLSRAL-HGK 748

  Fly   599 ----IAVFVEATDQP--TNPSERRFSLAVITIEVYATIDDQAIDFVGAPYEFWVGANTPLGTSVG 657
                |.:.|.|.|..  |.|...|.:::::...|...:.:|      |.|.|.|..:...||.||
Zfish   749 ANSVITMVVSAQDGGGLTAPVNARVNISIVAGLVAPPVFEQ------AQYYFVVSEDALRGTQVG 807

  Fly   658 QVRTTLIYEGGDEIMYDLLHTYSEGVP---FAIEERSGIITVIRELSEFKRKVYQFEAVAN---- 715
            .||.:.  :.|  ::.|:.:..|.|.|   |.::..:|.:.....|....:.....|..|:    
Zfish   808 VVRAST--KNG--VLKDISYIISSGDPTGYFTVDSETGALRTSLPLDHEAQPSLNLEVQAHCGNP 868

  Fly   716 --------------------YLFANSSQSLVMSRSSSPLTTIAS-PAELSDEGV----------- 748
                                ....:||:||::...:...|.:.. .||..|.|.           
Zfish   869 PAFGQTRVRITVSDVNDNAPVFLPSSSESLILPEDTRMGTVVYKVQAEDRDSGPNGLLSFDLFTS 933

  Fly   749 ----------------LITNLTIHIVNKPEQKVPLR----PVIEEINMNVIHFHVEENVVGGIIG 793
                            ||.:|:...:.:.:.:|..:    |.:......|||...|         
Zfish   934 SAHRTFSIDRNSGHLRLIGSLSYETMPRYDLQVIAKDSGAPQLSSTFTLVIHVQAE--------- 989

  Fly   794 QLLYKNGINLVNNELGTYREMPSEPTSRNITMGSRF---RSRNRSRSSKSKRRLPRRLVGDANIK 855
                 ||...|.:.| |||....|.|..|    :||   |:.||.....:.       :...:..
Zfish   990 -----NGQGPVFDSL-TYRVELKESTPLN----TRFLQVRAVNRDGGITTG-------LSSTSAS 1037

  Fly   856 LRYIIANQQEVVNKISITEDGTLLTLTGLDREQQPSYELTVIVEYSTGLVSGAGIYQVNIKVDDV 920
            |.|.:....:......:::.|.|...:.||||.:..|.|||:.....|.:...|...|.:.|.|.
Zfish  1038 LAYHLHPDGDAAGFGIVSDSGWLFVKSALDREAKEMYLLTVLATSGNGQLKKTGSATVRVSVMDE 1102

  Fly   921 NDNAPKFNALTYVGLINENCVVGTELSMNHAILIQDADEGPNAEFRVQLQGDYSDEFSIEYVNGT 985
            |||.|:|........:.||...||...   .:...|.|.|                     :||.
Zfish  1103 NDNTPRFTQERAFLAVRENLPAGTGFG---RVSASDRDAG---------------------LNGR 1143

  Fly   986 SSENSTHHKMPSTTGAFNIFNLTDQWNDEFKYQELHTTFMQTNFKLSSGPYFRISYTG----KRG 1046
            .|                             |:.||   :..:|:::       |:||    |..
Zfish  1144 LS-----------------------------YRLLH---LDRHFQIN-------SHTGEISTKLS 1169

  Fly  1047 LDREKQQLYNLKIIAADTG----GLSGYAHLTVLVADVNDNAPMFERISVFKDSRLEIRE----- 1102
            ||||.|..|.|.::|.|.|    ..:|.|.:|||  |.|||||.|......::..|:..|     
Zfish  1170 LDRELQSSYQLIVVAQDGGTPPRSATGTAFITVL--DENDNAPSFSNAQTGRELLLQALEGQPSG 1232

  Fly  1103 ------------------------------YTTDMEIYFVESSSGMT---APQATAAMML----A 1130
                                          :|.:.....:.|||.::   .|:.:..::.    :
Zfish  1233 FLLGTVHAKDPDEGENGTIFYSMSGPRAERFTLNPNTGELRSSSALSHSERPEYSFIILASDRGS 1297

  Fly  1131 PPPYHI-----------PGSPRFN-----------------VDRERS----------------VG 1151
            ||...|           .|||..|                 :...||                ||
Zfish  1298 PPQSSIIALKIQVLSSSKGSPNTNSQPLILKSVEGAKPGSMIGSVRSPDSQALPESGQVTFTVVG 1362

  Fly  1152 A----GLGVVARAKSRRRMVRALT-TKCP------------------------------------ 1175
            .    |..||.|......:.|.|. .|||                                    
Zfish  1363 GTDFDGTFVVDRQTGDIYLARELDFEKCPRYTLQVEVDDFSMPLPKSDIITLIIDVQDSNDHSPE 1427

  Fly  1176 ------LFAIYEDTPVGTKVLQLSASDED-FGKNALLHYELQGEQVERTPGMPMLRVHGVKYFAI 1233
                  :..:.|:|..|:......|.|:| .|.|:.:||.:    :::.|.:|.|       .::
Zfish  1428 FPEDPIIIVVPENTDPGSSFYTFQAVDKDGSGPNSEVHYSI----LQQWPNIPDL-------LSL 1481

  Fly  1234 DKLSGELSVNYPLSANIEIMLNLTVTDIDGLKD-------STCLRFTVMDVNNHAPTF-KKSWYS 1290
            |..:|.||:...|.......|.|.|...|...|       |...|..|.|||::.|.| ..|..|
Zfish  1482 DPTTGALSLGMMLDHEKTSSLLLVVQASDSALDVSQRRRGSVTARIFVTDVNDNEPVFISASVVS 1546

  Fly  1291 F--DTPEGEYKDSVLGQLTAIDMDFGENANITYTLSDSHL--PFTIKPASGVLKIGGQLDRELKD 1351
            .  |.|.|    .|:..:.|:|.|.|||..:||.:...::  .|:|.|.:|.|.|...:|||.:|
Zfish  1547 VMEDQPVG----FVVVYVMAVDADQGENGRVTYRIQSGNVRGKFSINPDTGSLSILRPIDREEED 1607

  Fly  1352 KYSFQVIATDNAPVMQRMSSSVDVEVNVLDINDNRPEFIGYDDQTKAVKFIPSVADRTLMLPVYK 1416
            .|:..::|.|:.  :|:.|||..:.|.|:|:||..|.|  .:.|                   |:
Zfish  1608 LYNLTIVAEDHG--LQQRSSSQLLSVQVIDVNDEAPYF--QESQ-------------------YE 1649

  Fly  1417 AYLDRSTQPGTFVRQLTAIDKDNVGNGNGLVLY-SIRHQEMQAPLFQIDSRDGTISTISRINGYN 1480
            |::..:...|:.|..::|.|.|.  ..||:|.| ||...:     |.|....|.|:|...:    
Zfish  1650 AFIAENQPAGSTVLVVSASDMDQ--GTNGIVTYGSIVGDD-----FSIHPVTGVITTTKAL---- 1703

  Fly  1481 DYEHLNV---SVIASDVGSPALSATAIVIVNLQGQAVTDPPKSTPKPEPPANVTVFQHAYYEVKL 1542
            |.|...|   :|.|.|.|||...|...|.|     .|.|...:.|         .|...||.:::
Zfish  1704 DREAQGVYALTVYARDGGSPPNFAKTTVRV-----TVLDENDNRP---------AFGRVYYSLEV 1754

  Fly  1543 TENNEAPIEVMRLNLS------AGLNPENYRWSLWLEEGLDETDAHPPFEYDAKNMLLYALKPFD 1601
            .||.| |:.:..:..:      :||  ..||        :.:.|....|..|.|..:|...:..|
Zfish  1755 PENQE-PVTLFTIRATDQDSGDSGL--VYYR--------ITDGDHFGDFHLDKKLGVLSTSRALD 1808

  Fly  1602 REHISRYQLRIRADRLSREARNYARVSYPVVDERIEGLSLNECRILVHIADENDNAPKFRGNGQP 1666
            ||..::|.|.:.|.                 |:.|..|: :...:.:.:.|.|||:|.|..:...
Zfish  1809 RESRAKYTLTVEAQ-----------------DQGIPSLT-STVTLDISVLDLNDNSPVFPSSSYS 1855

  Fly  1667 IVAVLPQSASFGYPVTRVEANDLDEGLNAEIRYRLLNEPARLFGIDELSGNIRLLGELSRTEHI- 1730
            :  .:.:.||.|..|..|.|:|.|||.|:::.|.|..|.:.:|.:|:.:|.|.....|.| |.: 
Zfish  1856 V--EVSEDASAGSLVLEVSASDKDEGSNSQVVYFLSRESSGMFIVDQHTGRIITAATLDR-EKVA 1917

  Fly  1731 -YGFDVKATDRMGADDGRSGIVNVFVYIINEAKQVRLVVAGMPVEVERRIEGLME----ALSDAI 1790
             |.|.|.|.| ..|.:.|:....|.|:|::........:.. |:.:...|..|..    |...|.
Zfish  1918 SYNFQVYAMD-SSATNPRNSSAEVAVHILDVNDNAPFFITD-PLIINVSISSLSNHRVLATMRAE 1980

  Fly  1791 GKD------VRVRLLEPYSGGLEPATNAYIYAVDPHTNSIMEMEQLQDALAGLQLDALQLQQQKL 1849
            .||      |..|...|..|          :.::..|.:|...|:||         ||...|:.|
Zfish  1981 DKDFGANGSVFYRFANPVKG----------FTINSLTGAIQATEKLQ---------ALTQSQRIL 2026

  Fly  1850 DGGKPMPRILELAEFGQLARPAHASASSFMGGLEFVTVVLLALISLGALIAACCYVCMRQK---- 1910
                    |:|..:.|   .|:.:                    |||.:|     |.:|::    
Zfish  2027 --------IVEAMDQG---NPSQS--------------------SLGVVI-----VYIREQSYQG 2055

  Fly  1911 -RRLWSQRDFS--------------------ASDAGLTYTIAGIGSPRGQKQRRQRQQRHT-QRC 1953
             |...:.||.|                    .|.:|:.|:|..     |.||:......|| :..
Zfish  2056 VRFSRNTRDVSLQENAAKGTAVVQIHAQYPDGSTSGINYSIFS-----GNKQQSFSISHHTGEIW 2115

  Fly  1954 SKGSTGSQRPTSAFMPESVCSSAQTQSTATATEKLEQ---------QLHHH 1995
            .:.|||.....:..:...|.:...:.|:..|...|.|         |||::
Zfish  2116 VEDSTGLDFEETPRLRLVVKAETASSSSFMAVNLLLQDVNDNLPRFQLHNY 2166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad89DNP_650554.3 Cadherin_repeat 183..290 CDD:206637 40/209 (19%)
Cadherin_repeat 325..407 CDD:206637 22/84 (26%)
Cadherin_repeat 416..524 CDD:206637 31/111 (28%)
Cadherin_repeat 534..626 CDD:206637 29/98 (30%)
Cadherin_repeat 641..>714 CDD:206637 18/75 (24%)
CA 851..925 CDD:214520 20/73 (27%)
CA 1026..1085 CDD:214520 24/66 (36%)
Cadherin_repeat 1177..1280 CDD:206637 29/110 (26%)
Cadherin_repeat 1289..1385 CDD:206637 34/99 (34%)
Cadherin_repeat 1414..1510 CDD:206637 30/99 (30%)
CA 1576..1658 CDD:214520 18/81 (22%)
Cadherin_repeat 1666..1760 CDD:206637 31/95 (33%)
dchs1aXP_002664697.2 Cadherin_repeat 45..135 CDD:206637
Cadherin_repeat 145..247 CDD:206637 17/108 (16%)
Cadherin_repeat 256..354 CDD:206637 15/98 (15%)
Cadherin_repeat 370..464 CDD:206637 19/94 (20%)
Cadherin_repeat 472..571 CDD:206637 27/110 (25%)
Cadherin_repeat 580..678 CDD:206637 31/111 (28%)
Cadherin_repeat 686..778 CDD:206637 29/95 (31%)
Cadherin_repeat 791..886 CDD:206637 19/98 (19%)
Cadherin_repeat 900..990 CDD:206637 14/103 (14%)
Cadherin_repeat 1000..1105 CDD:206637 29/115 (25%)
Cadherin_repeat 1118..1208 CDD:206637 35/154 (23%)
Cadherin_repeat 1227..1311 CDD:206637 9/83 (11%)
Cadherin_repeat 1331..1424 CDD:206637 13/92 (14%)
Cadherin_repeat 1432..1535 CDD:206637 29/113 (26%)
Cadherin_repeat 1544..1638 CDD:206637 33/99 (33%)
Cadherin_repeat 1647..1741 CDD:206637 33/128 (26%)
Cadherin_repeat 1750..1845 CDD:206637 25/123 (20%)
Cadherin_repeat 1861..1950 CDD:206637 31/90 (34%)
Cadherin_repeat 1958..2048 CDD:206637 29/144 (20%)
Cadherin_repeat 2065..2157 CDD:206637 18/96 (19%)
Cadherin_repeat 2166..2262 CDD:206637 0/1 (0%)
Cadherin_repeat 2269..2362 CDD:206637
Cadherin_repeat 2371..2466 CDD:206637
Cadherin_repeat 2474..2583 CDD:206637
Cadherin_repeat 2591..2686 CDD:206637
Cadherin_repeat 2694..2790 CDD:206637
Cadherin_repeat 2802..2896 CDD:206637
Cadherin_C <3109..3156 CDD:279398
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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