Protein Alignment Cad89D and pcdh20

DIOPT Version :9

• Sequence 1: NP_650554.3
• Gene: Cad89D / 42006
• FlyBaseID: FBgn0038439
• Length: 2240
• Species: Drosophila melanogaster
• Sequence 2: NP_001338646.1
• Gene: pcdh20 / 100007362
• -ID: -
• Length: 881
• Species: Danio rerio
• Alignment Length: 977
• Identity: 222/977 - (22%)
• Similarity: 336/977 - (34%)
• Gaps: 295/977 - (30%)

  Fly   675 LLHTYSEGVPFAIEERSGIITVIRELSEFKRKVYQFE----------AVANYLFANSSQSLVMSR 729
            :|..||  :||:..            |.|...:|:.:          |::..|..:.|.:...|.
Zfish    21 ILLLYS--IPFSCS------------SNFSHLIYKIKEGLPKGTLIGAISADLTLDLSVNPSRSF 71

  Fly   730 SSSPLTTIASPAEL-SDEGVLITN--------------------LTIHIVNKPE---QKVPLRPV 770
            |...:||......| |..|.|.|:                    :.:.::..|:   |.|.::.:
Zfish    72 SLEQMTTSEHYVNLNSTTGELFTSAIEIDRESLCAESHEGQGCAIFLDVLILPQQYFQLVKIKII 136

  Fly   771 IEEINMNVIHFHVEENVVGGIIGQLLYKNGINLVNNELGTYREMPSEPTSRNITMGSRFRSRNRS 835
            ||:||.|..||.::|               |.|            |.|  .|..:.:||.....:
Zfish   137 IEDINDNSPHFPMDE---------------IRL------------SVP--ENAPVNARFAVEQSA 172

  Fly   836 RSSKSKRRLPRRLVGDANIKLRYIIANQQEVVN-KISITEDGTL---LTLT-GLDREQQPSYELT 895
            ....         :|..::: .|.:.|...|.. .:...|.|.|   |.|| .||||.:..| :|
Zfish   173 VDPD---------IGIHSVQ-TYWLNNDYGVFTLDVEENEGGELTPFLILTESLDREARAEY-VT 226

  Fly   896 VIVEYSTGLVSGAGIYQVNIKVDDVNDNAPKFNALTYVGLINENCVVGTELSMNHAILIQDADEG 960
            .|:....|.....|...:.|.:.|||||.|||........:..|...|.:|:...|   .|.|||
Zfish   227 EIIAEDGGSPPRFGNATLRIIISDVNDNCPKFRESQVKVTLYGNATKGMQLARLQA---YDPDEG 288

  Fly   961 PNA----EFRVQLQGDYSDEFSIEYVNGT------SSENSTH----------------------H 993
            .||    .|..::..:....|.::...|.      .:.||..                      |
Zfish   289 ANALITYTFSERVSQESKSLFHLDTTTGVLKLAGKINNNSAKLYKINILANGAGCIPDVAMVSVH 353

  Fly   994 KMPSTTG---------AFNIFNLTDQWNDEFKYQEL-HTTFMQTN-------FKLSSGPYFRISY 1041
            .:...:|         ||....:......|..:..: ..|...|.       |..|:||:..:.|
Zfish   354 VIKQLSGPPTVVPRYIAFEKDGVVSLSESEPPFSPIAFFTIKNTEAQQKLECFLESAGPFRIVPY 418

  Fly  1042 TGKRG---------LDREKQQLYNLKIIAADTGGLSGYAHLTVLVADVNDNAPMFERISVFKDSR 1097
            .|.:.         ||.|.||.|.:.|:..::.||:....:.|.|.|||||||      |||.|.
Zfish   419 QGLKNEYLLETTDVLDYELQQDYEIVIVVRNSHGLAVNTVVKVHVLDVNDNAP------VFKQSF 477

  Fly  1098 LEIREYTTDMEIYFVESSSGMTAPQATAAMMLAPPPYHIPGSPRFNVDRERSVGAGLGVVARAKS 1162
            :||
Zfish   478 VEI-------------------------------------------------------------- 480

  Fly  1163 RRRMVRALTTKCPLFAIYEDTPVGTKVLQLSASDEDFGKNALLHYELQGEQVERTPGMPMLRVHG 1227
                           |:.|:.|..|.:.||.|||.|......::|:|..:       .|.:
Zfish   481 ---------------AVEENNPPNTFLAQLQASDADSESRGQVYYQLGAD-------APTI---- 519

  Fly  1228 VKYFAIDKLSGELSVNYPLSANIEIMLNLTVTDID---GLKDS-TCLRFTVMDVNNHAPTFKKSW 1288
               |.||..:|.|:|:..|....:......|..:|   ..|:| ..:..||.|.|:::|.|....
Zfish   520 ---FNIDSYTGVLTVSTSLDREEKETYRFMVRALDRGTPKKESIATVIITVQDRNDNSPRFINKD 581

  Fly  1289 YSFDTPEGEYKDSVLGQLTAIDMDFGENANITYTLSDSHLPFTIKPASGVLKIGGQLDRELKDKY 1353
            ::|..||.......:|.||..|.|.|||..:..::.:....|.|....|.|:....||||.:..|
Zfish   582 FTFFVPENFPGFGEIGVLTVTDADAGENGWVALSILNGSDIFVIDTGRGALRAKTPLDREQQGTY 646

  Fly  1354 SFQVIATDNAPVMQRMSSSVDVEVNVLDINDNRPEFIGYDDQTKAVKFIPSVADRTLMLPVYKAY 1418
            ...:.|.|...  ..:|....|.|.:||:|||.|          .|.|..|.....|:||
Zfish   647 YVWIEAIDGGE--PALSCVTMVTVLLLDVNDNPP----------TVLFPQSNQSFMLVLP----- 694

  Fly  1419 LDRSTQPGTFVRQLTAIDKDNVGNGNGLVLYS-IRHQEMQAPLFQIDSRDGTISTISRINGYNDY 1482
               ||.|||.:.::.|:|:|.  ..|.::.|| |:..:.:...|.||...|.|:....:|....|
Zfish   695 ---STVPGTSITEVYAVDRDT--GMNAVIAYSIIKRTDGEPGSFDIDPYTGNITLRKALNSRGLY 754

  Fly  1483 EHLNVSVIASDVGSPALSATAIVIVNLQGQAVTDPPKSTPKPEPPANVTVFQHAYYEVKLTENNE 1547
               ::.|...|.|.|.|.:|  |:|||...            |..:|.|:.|.....|...::.|
Zfish   755 ---SLWVKVRDHGQPELYST--VLVNLFVN------------ETVSNETLIQSLLPRVVDLDHGE 802

  Fly  1548 AP 1549
            ||
Zfish   803 AP 804

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cad89D	NP_650554.3	Cadherin_repeat	183..290	CDD:206637
		Cadherin_repeat	325..407	CDD:206637
		Cadherin_repeat	416..524	CDD:206637
		Cadherin_repeat	534..626	CDD:206637
		Cadherin_repeat	641..>714	CDD:206637	9/48 (19%)
		CA	851..925	CDD:214520	24/78 (31%)
		CA	1026..1085	CDD:214520	23/74 (31%)
		Cadherin_repeat	1177..1280	CDD:206637	28/106 (26%)
		Cadherin_repeat	1289..1385	CDD:206637	28/95 (29%)
		Cadherin_repeat	1414..1510	CDD:206637	28/96 (29%)
		CA	1576..1658	CDD:214520
		Cadherin_repeat	1666..1760	CDD:206637
pcdh20	NP_001338646.1	Cadherin_repeat	42..143	CDD:206637	19/100 (19%)
		Cadherin_repeat	151..254	CDD:206637	31/142 (22%)
		Cadherin_repeat	265..355	CDD:206637	16/92 (17%)
		Cadherin_repeat	376..469	CDD:206637	23/92 (25%)
		Cadherin_repeat	479..573	CDD:206637	30/184 (16%)
		Cadherin_repeat	582..676	CDD:206637	28/95 (29%)
		Cadherin_repeat	692..778	CDD:206637	31/100 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910