DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dhfr and THY-1

DIOPT Version :10

Sequence 1:NP_732147.1 Gene:Dhfr / 42003 FlyBaseID:FBgn0004087 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_179230.1 Gene:THY-1 / 816134 AraportID:AT2G16370 Length:519 Species:Arabidopsis thaliana


Alignment Length:176 Identity:66/176 - (37%)
Similarity:103/176 - (58%) Gaps:12/176 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FNLIVAVCENFGIGIRGDLPWRIKSELKYFSRTTKRTSDPTKQNAVVMGRKTYFGVPESKRPLPD 68
            :.::||..:..|||..|.|||.:.::||:|...|..|||.:|:|||||||||:..:|...|||..
plant    22 YQVVVAATKEMGIGKDGKLPWNLPTDLKFFKDITLTTSDSSKKNAVVMGRKTWESIPIKYRPLSG 86

  Fly    69 RLNIVLSTTLQESDL--PKGVLLCPNLETAMKILEEQN---EVENIWIVGGSGVYEEAMASPRCH 128
            |||:|| |.....|:  .:.|:.|.::::|:.:|....   .:|.::::||..:..||:..|.|.
plant    87 RLNVVL-TRSGGFDIANTENVVTCSSVDSALDLLAAPPYCLSIERVFVIGGGDILREALNRPSCD 150

  Fly   129 RLYITKIMQKFDCDTFFPAIPDSFREVAP-DSDMPLGVQEENGIKF 173
            .:::|:|....|||||.|||..|..:  | .|..|:   .|||::|
plant   151 AIHLTEIDTSVDCDTFIPAIDTSVYQ--PWSSSFPV---TENGLRF 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DhfrNP_732147.1 DHFR 4..179 CDD:238127 66/176 (38%)
THY-1NP_179230.1 PTZ00164 17..519 CDD:240299 66/176 (38%)

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