DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dhfr and dfr1

DIOPT Version :10

Sequence 1:NP_732147.1 Gene:Dhfr / 42003 FlyBaseID:FBgn0004087 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_588353.1 Gene:dfr1 / 2539048 PomBaseID:SPCC1223.08C Length:461 Species:Schizosaccharomyces pombe


Alignment Length:213 Identity:60/213 - (28%)
Similarity:106/213 - (49%) Gaps:37/213 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LIVAVCE-NFGIGIRGDLPWRIKSELKYFSRTTKRTSDPTK--------QNAVVMGRKTYFGVPE 61
            :||||.. |.|||.:..:||.||.|:.||:..|..|....:        .|.|:|||..|..:|:
pombe   236 MIVAVSSPNLGIGKKNSMPWHIKQEMAYFANVTSSTESSGQLEEGKSKIMNVVIMGRSCYDSLPK 300

  Fly    62 SKRPLPDRLNIVLSTT-------LQESDLPKGVLLCPNLETAMKILEEQN------EVENIWIVG 113
            ..|||.||:|||::..       .::..:|:.:.....:::|:.::.|:.      :|..::|:|
pombe   301 KNRPLKDRINIVITRNSNYNFGLTKKEKMPENLYAADCIDSALDLVAEKYGADSDIQVGKVFIIG 365

  Fly   114 GSGVYEEAMASPRCHRLYITKIMQKFDCDTFFPAIP----DSFREVAPDSDMPLGVQEENG---- 170
            ||.:|..|:..|....|..|:|.:::.||:|||..|    |..|:..|:.:..:|:..|.|    
pombe   366 GSFLYGSALYHPLTKNLLFTRIHKEYPCDSFFPFEPAESSDWVRKAHPELEKFVGIPVEEGRLKA 430

  Fly   171 -------IKFEYKILEKH 181
                   ::.|:::..|:
pombe   431 ASSNKEEVEIEFELYGKN 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DhfrNP_732147.1 DHFR 4..179 CDD:238127 59/209 (28%)
dfr1NP_588353.1 FSH1 2..213 CDD:461110
DHFR 234..424 CDD:238127 56/187 (30%)
Blue background indicates that the domain is not in the aligned region.

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