DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dhfr and Dhfr

DIOPT Version :10

Sequence 1:NP_732147.1 Gene:Dhfr / 42003 FlyBaseID:FBgn0004087 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_569084.1 Gene:Dhfr / 24312 RGDID:2500 Length:187 Species:Rattus norvegicus


Alignment Length:187 Identity:89/187 - (47%)
Similarity:127/187 - (67%) Gaps:9/187 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLR-FNLIVAVCENFGIGIRGDLPW-RIKSELKYFSRTTKRTSDPTKQNAVVMGRKTYFGVPESK 63
            |:| .|.||||.:|.|||..||||| .:::|.|||.|.|..:|...|||.|:|||||:|.:||..
  Rat     1 MVRPLNCIVAVSQNMGIGKNGDLPWPLLRNEFKYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEKN 65

  Fly    64 RPLPDRLNIVLSTTLQESDLPKGV-LLCPNLETAMKILEE---QNEVENIWIVGGSGVYEEAMAS 124
            |||.||:|||||..|:|.  |:|. .|..:|:.|:|::|:   .::|:.:|:||||.||:|||..
  Rat    66 RPLKDRINIVLSRELKEP--PQGAHFLAKSLDDALKLIEQPELASKVDMVWVVGGSSVYQEAMNQ 128

  Fly   125 PRCHRLYITKIMQKFDCDTFFPAIPDSFREVAPDSDMPLG-VQEENGIKFEYKILEK 180
            |...||::|:|||:|:.|||||.|.....::.|:....|. :|||.|||:::::.||
  Rat   129 PGHLRLFVTRIMQEFESDTFFPEIDLEKYKLLPEYPGVLSEIQEEKGIKYKFEVYEK 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DhfrNP_732147.1 DHFR 4..179 CDD:238127 85/180 (47%)
DhfrNP_569084.1 DHFR 5..184 CDD:238127 87/182 (48%)

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