DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dhfr and dhfr

DIOPT Version :10

Sequence 1:NP_732147.1 Gene:Dhfr / 42003 FlyBaseID:FBgn0004087 Length:182 Species:Drosophila melanogaster
Sequence 2:XP_002942406.1 Gene:dhfr / 100486206 XenbaseID:XB-GENE-975267 Length:189 Species:Xenopus tropicalis


Alignment Length:181 Identity:75/181 - (41%)
Similarity:119/181 - (65%) Gaps:9/181 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IVAVC-ENFGIGIRGDLPW-RIKSELKYFSRTTKRTSDPTKQNAVVMGRKTYFGVPESKRPLPDR 69
            :|||| .|.|||..|.||| .:::|.|:|.|.|...:...|:|.|:|||||:|.:||..|||.:|
 Frog     9 VVAVCPPNQGIGKEGSLPWPLLRNEFKHFQRLTMTPTVEDKKNVVIMGRKTWFSIPEKNRPLKER 73

  Fly    70 LNIVLSTTLQESDLPKGV-LLCPNLETAMKILEE---QNEVENIWIVGGSGVYEEAMASPRCHRL 130
            :|||||..|:|.  |.|. .|..:|..|:.:||:   :::|:.:|::|||.:|:|.|..|...|.
 Frog    74 INIVLSKELKEP--PTGAHYLSKSLAEAIDLLEDPELKDKVDLVWVIGGSSLYQELMEKPVNQRW 136

  Fly   131 YITKIMQKFDCDTFFPAIP-DSFREVAPDSDMPLGVQEENGIKFEYKILEK 180
            ::|:|:|:|:|||:.|.|. :|||.:.....:...:|||||:::::::.||
 Frog   137 FVTRILQEFECDTYLPEIDLNSFRLLPEYPGISPELQEENGVQYKFEVYEK 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DhfrNP_732147.1 DHFR 4..179 CDD:238127 73/178 (41%)
dhfrXP_002942406.1 DHFR 6..186 CDD:238127 73/178 (41%)

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