DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gyc89Db and Gucy2c

DIOPT Version :9

Sequence 1:NP_650551.1 Gene:Gyc89Db / 42002 FlyBaseID:FBgn0038436 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_037302.1 Gene:Gucy2c / 25711 RGDID:2771 Length:1072 Species:Rattus norvegicus


Alignment Length:792 Identity:180/792 - (22%)
Similarity:293/792 - (36%) Gaps:230/792 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 FKTHQIYPDKLMPD--------------FAAALSAS---TGESFDFCMNFFGRCFVRFFSNFGYD 83
            |..|....|...|:              |.|..|.|   ..|..||.:.:.....:     ||: 
  Rat   275 FSNHYFEDDTRAPEYMDNVLVLTLPPEKFIANASVSGRFPSERSDFSLAYLEGTLL-----FGH- 333

  Fly    84 KMIRSTGRYFCDFLQSIDNIHVQMRFTYPKMKSPSMQLT--------NMDDDGAV-----ILYRS 135
             |:::       ||::.:::      |.||.......||        .:||.|.:     :||.|
  Rat   334 -MLQT-------FLENGESV------TTPKFARAFRNLTFQGLEGPVTLDDSGDIDNIMCLLYVS 384

  Fly   136 GRTGMSKYLIGQMTEVAKEFYGLDMTAYVLESQ---NDICGGTAGP--------------IKLTE 183
            ..|...|.|:...|...:.........::.::.   ||:.|  .||              :.|..
  Rat   385 LDTRKYKVLMAYDTHKNQTIPVATSPNFIWKNHRLPNDVPG--LGPQILMIAVFTLTGIVVVLLL 447

  Fly   184 GPLTVIVKYRLDFDNRDYMAKRVNVIAHPSQLKMPSVDLNVFLELFPFTIVLDHD---------- 238
            ..|.|:.|||.|.:.|......:     ||:...| ::.|   |....::.:|.|          
  Rat   448 IALLVLRKYRRDHELRQKKWSHI-----PSENIFP-LETN---ETNHVSLKIDDDRRRDTIQRVR 503

  Fly   239 ------MKITLAG-----------EKIVETWILHNPGVNPKTFIGS-----------HILERFKC 275
                  .|:.|..           :||....:|.:...|...|.|:           ...||...
  Rat   504 QCKYDKKKVILKDLKHCDGNFSEKQKIELNKLLQSDYYNLTKFYGTVKLDTRIFGVVEYCERGSL 568

  Fly   276 RR--------PKDTQIQWETILQMRTVLFEFELIRTGHNRAAYDAALNFDF------ENFDEASS 326
            |.        |..|.:.||         |:..::.        |.|....:      |......|
  Rat   569 REVLNDTISYPDGTFMDWE---------FKISVLN--------DIAKGMSYLHSSKIEVHGRLKS 616

  Fly   327 LN-EAQAMALASAKEFSAENAKEEAAAAATSKDEIDPATGQRR-----HSVGLRSILLKGQMFY- 384
            .| ...:..:....:|...:.........|:.:.:..||..::     .|:..:.|:|:.:.|| 
  Rat   617 TNCVVDSRMVVKITDFGCNSILPPKKDLWTAPEHLRQATISQKGDVYSFSIIAQEIILRKETFYT 681

  Fly   385 --IKDVDSLIFLCSP-----------LIENLDELHGIGLYLNDLNPHGLSRELVMAGWQH----- 431
              .:|.:..||....           .:|..||.. :.:||           ||.:.|:.     
  Rat   682 LSCRDQNEKIFRVENSYGTKPFRPDLFLETADEKE-LEVYL-----------LVKSCWEEDPEKR 734

  Fly   432 ---------CSKLEIMF--EKEEQRSDEL---------------EKSLELADSWKRQGDELLYSM 470
                     .:|:..:|  :|.|...|.|               |:..:|..:.:.:.|.|.:.:
  Rat   735 PDFKKIESTLAKIFGLFHDQKNESYMDTLIRRLQLYSRNLEHLVEERTQLYKAERDRADHLNFML 799

  Fly   471 IPRPIAERMRKSEEHVCQSFEEVSVIFIEVMNIYDSGSNNI---QDAMQAVTTLNKVFSALDEEI 532
            :||.:.:.:::......:.:|||::.|.:::     |...|   ...|:.|..||.::.:.|:.:
  Rat   800 LPRLVVKSLKEKGIVEPELYEEVTIYFSDIV-----GFTTICKYSTPMEVVDMLNDIYKSFDQIV 859

  Fly   533 ISPFVYKVETVGMVYMAVSGAPDVNPLHAEHACDLA------LRVMKKVKAHALPG--VAIRVGI 589
            ....||||||:|..|:..||.|..|  ...||.|::      |..|...:...|||  |.||:|:
  Rat   860 DHHDVYKVETIGDAYVVASGLPMRN--GNRHAVDISKMALDILSFMGTFELEHLPGLPVWIRIGV 922

  Fly   590 NSGPVVAGVVGMKVPRYCLFGDTVNTASRMESSSDPWMIQLSNYTALKVQKVG--YKVEARGFVK 652
            :|||..|||||:|:||||||||||||||||||:..|..|.:|:.|...:::..  :..|.||...
  Rat   923 HSGPCAAGVVGIKMPRYCLFGDTVNTASRMESTGLPLRIHMSSSTIAILRRTDCQFLYEVRGETY 987

  Fly   653 VKGKGEMETYWL 664
            :||:|...||||
  Rat   988 LKGRGTETTYWL 999

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc89DbNP_650551.1 HNOB 2..161 CDD:400167 31/154 (20%)
HNOBA 218..479 CDD:400168 58/363 (16%)
Nucleotidyl_cyc_III 488..665 CDD:416391 76/190 (40%)
Gucy2cNP_037302.1 Periplasmic_Binding_Protein_Type_1 34..414 CDD:299141 31/158 (20%)
PKc_like 479..749 CDD:304357 46/301 (15%)
STYKc 501..744 CDD:214568 41/271 (15%)
CYCc 787..978 CDD:214485 70/197 (36%)
Guanylate_cyc 814..1001 CDD:278633 76/193 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.