DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gyc89Db and phlp-2

DIOPT Version :9

Sequence 1:NP_650551.1 Gene:Gyc89Db / 42002 FlyBaseID:FBgn0038436 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001337270.1 Gene:phlp-2 / 185690 WormBaseID:WBGene00009647 Length:1126 Species:Caenorhabditis elegans


Alignment Length:574 Identity:104/574 - (18%)
Similarity:200/574 - (34%) Gaps:189/574 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 FVRFFSNFGYDKMIRSTGRYFCD-----------FLQSIDNIHVQM-RFTYPKMKSPSMQLTNMD 125
            |:|.:|:.|.    ||| |..||           |  |.|.|.:|: .:.:.::||.:..|..:.
 Worm    26 FLRLYSSDGQ----RST-RIECDEHTTCAQICQQF--SCDVITLQIGNYHFRQLKSDTSPLAILQ 83

  Fly   126 DDGAVILYRSGRTGMSKYLIGQMTEVAKEFYGLDMTAYVLESQNDICGGTAGPIKLTEGPLTVIV 190
            |...::      |...:.|..:.|..|.|    |:.:|                  |:.|   ..
 Worm    84 DFCRIL------TMSDENLETESTSKALE----DILSY------------------TDSP---AF 117

  Fly   191 KYRLDFDNRDYMAKRVNVIAHPSQLKMPSVDLNVFLELFPFTIVLDHDMKITLAGEKIVETW--- 252
            ::...|           .:..|......:::|::..|            ::.:...|::.||   
 Worm   118 RHIFSF-----------FLGRPRIRAKSTLNLDILSE------------EVVIRKGKLIHTWQNA 159

  Fly   253 --ILHNPGVNPKT-------------FIGSHILERFKCRRPKDTQIQWETILQMRTVLFEF---- 298
              :.:|..:..:|             .:..|..:|.:..|.||..:.:..|.|...:|..:    
 Worm   160 RAVFYNSNIRLQTKNNQDEALQIRNMKVDVHESKRGRALRLKDDDVCYLIIFQRPNILEAWLTRA 224

  Fly   299 -ELIRTGHNRAAYDAALNFDFENFDEASSL-------NEAQAMAL-ASAKEFSAENAKEEAAAAA 354
             ::.::.|    .||:        ||..:|       |||:...| .......:....|::.|..
 Worm   225 QQVEKSNH----VDAS--------DEQLTLIPEQILNNEARVQILNLRRNSLISRPPTEKSMAPL 277

  Fly   355 TSKDEIDPATGQRRHSV---------------------GLRSILLKGQMFYIKDVDSLIFLCSPL 398
            ...|::     .|.||:                     .||.:.|...  ||..|.|   .||  
 Worm   278 GYIDDL-----YRVHSLQVIDLSANQILSFPIQLTLLSHLRQLNLSSN--YISSVPS---ECS-- 330

  Fly   399 IENLDELHGIGLYLNDLN--PHGLSRELVMAGWQHCSKLEIMFEKEEQRSDEL-EKSLELADSWK 460
              |:..|..:.|..|.|:  |..:| ||     |:...|:|.|.:..|....| ..:||:   |:
 Worm   331 --NMRRLQYLNLSNNQLDTLPDSIS-EL-----QNLQSLDISFNQFSQIPPCLFHLTLEM---WR 384

  Fly   461 RQGDELLYSMIPRPIAERMRKSE--------------EHVCQ-SFEEVSVI---------FIEVM 501
            ..|:.:  ..|.|....:::|.:              |::.. ...:.|:|         |::|:
 Worm   385 LAGNNI--EKIDRVGEMQIQKIDLRRNVLDTSFRLDIENITHLDLRDNSMISTVHLTNLRFLKVI 447

  Fly   502 NIYDSGSNNIQDAMQAVTTLNKVFSALDEEIISPFVYKVETVGMVYMAVSGAPD 555
            :......:::..:.:::|.:....:.||..::.|....::|:.:.:......||
 Worm   448 HCERLQLSSLHLSGESLTHVYADHNLLDSLVVMPLPQNLQTLSLSFNHFRNLPD 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc89DbNP_650551.1 HNOB 2..161 CDD:400167 25/99 (25%)
HNOBA 218..479 CDD:400168 61/315 (19%)
Nucleotidyl_cyc_III 488..665 CDD:416391 11/78 (14%)
phlp-2NP_001337270.1 leucine-rich repeat 232..253 CDD:275380 8/32 (25%)
leucine-rich repeat 254..288 CDD:275380 5/38 (13%)
PLN00113 283..>718 CDD:331614 46/244 (19%)
leucine-rich repeat 289..311 CDD:275380 0/21 (0%)
leucine-rich repeat 312..334 CDD:275380 10/30 (33%)
leucine-rich repeat 335..357 CDD:275380 8/27 (30%)
leucine-rich repeat 358..379 CDD:275380 5/20 (25%)
leucine-rich repeat 380..440 CDD:275380 10/64 (16%)
leucine-rich repeat 441..485 CDD:275380 6/43 (14%)
leucine-rich repeat 486..508 CDD:275380 3/16 (19%)
leucine-rich repeat 509..534 CDD:275380
leucine-rich repeat 554..577 CDD:275380
leucine-rich repeat 578..602 CDD:275380
leucine-rich repeat 603..625 CDD:275380
leucine-rich repeat 626..649 CDD:275380
leucine-rich repeat 650..672 CDD:275380
leucine-rich repeat 673..694 CDD:275380
PP2Cc 754..985 CDD:214625
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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