DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gyc89Db and gcy-18

DIOPT Version :9

Sequence 1:NP_650551.1 Gene:Gyc89Db / 42002 FlyBaseID:FBgn0038436 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_502449.2 Gene:gcy-18 / 178237 WormBaseID:WBGene00001543 Length:1113 Species:Caenorhabditis elegans


Alignment Length:666 Identity:162/666 - (24%)
Similarity:265/666 - (39%) Gaps:160/666 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VRFFSNFGY---DKMIRSTGRYFCDFLQSIDNIHVQMRFTYPKMKSPSMQLTNMDDDGAVILYRS 135
            |.||..|.|   .::.:...|.|.|.||.||...|:...:   :.|.:.:|:|:           
 Worm   514 VVFFFLFRYCENKQLEKMPWRIFHDDLQFIDEEQVKSMMS---VGSVTTKLSNI----------- 564

  Fly   136 GRTGMSKY-LIGQMTEVAKEFY-----------GLDMTAYVLESQNDICGGTAGPIKLTEGPLTV 188
             :||..:: :||..|......|           .:.:...:.::.:|......|.....:..:.|
 Worm   565 -QTGQKQHAIIGVNTHTTYHRYKQRRPIKFIKEDMQLLTQMKQAVHDNLNPFLGAAFNEKEEMLV 628

  Fly   189 IVKY--RLDFDNRDYMAKRVNVIA----HPSQLKMPSVDLNVFLE------------LFPFTIVL 235
            :.|:  |....:..|.|   ||:.    |.:.::    |:.:.||            |.|:..::
 Worm   629 LWKFCSRGTIQDIIYNA---NVVLDEKFHGAFVR----DITLGLEYLHASPIGYHGSLTPWCCLI 686

  Fly   236 DHDMKITLAGEKIVETWILHNPGVNPKTFIGSHILERFKCRRPKDTQIQWETILQMRTVLFEFEL 300
            |.:..:.|:...|          .||        |||            ||              
 Worm   687 DRNWMVKLSDYGI----------ANP--------LER------------WE-------------- 707

  Fly   301 IRTGHNRAAYDAALNFDFENFDEASSLNEAQAMALASAKEFSAENAKEEAAAAATSKDEIDPATG 365
                 .:.|.:.|...|.::..:||.......||....|  :.|..|......:..|..:.....
 Worm   708 -----KQGAIEIAAAKDSDDKSQASQATSIIYMAPELLK--NRETNKRRGMDQSWVKQSMLRRQA 765

  Fly   366 QRRHSVG--LRSILLKGQMF-----------YIKDVDSLIFLCSPLIENLDELH-GIGLYLNDL- 415
            ...:|.|  :..||.:...|           |:.|....:   ||.|:|...|| .:...|.|. 
 Worm   766 GDIYSFGMVMYEILFRSLPFRDNTNISELVDYLADGSKTV---SPEIQNQMGLHPDLNALLRDCW 827

  Fly   416 --NPH--------GLSRELVMAGWQHCSKLEIMFEKEEQRSDELEK-------SLELADSWKRQG 463
              ||.        .|:.|:|:.  ...|.::.|.:..||.::.|||       .||.|:.   :.
 Worm   828 SENPEIRPSIRRVRLNTEMVLK--TKGSLVDQMMKMMEQYANNLEKLVAERTGMLEEANI---RA 887

  Fly   464 DELLYSMIPRPIAERMRKSEEHVCQSFEEVSVIFIEVMNIYD--SGSNNIQDAMQAVTTLNKVFS 526
            |:||..::|..:|..::.......:.:...:::|.:::....  |||.    .::.|..||.:::
 Worm   888 DQLLTQLLPAYVANELKMGRSVAPKLYSSATILFSDIVGFTTICSGST----PLEVVNMLNGLYT 948

  Fly   527 ALDEEIISPFVYKVETVGMVYMAVSGAPDVNPL-HAEHACDLALRVMKKVKAHALP-----GVAI 585
            ..||.|.....|||||:|..||.|||.|:.|.. |:.:..:.||.:.:.:..:.:|     .|..
 Worm   949 GFDECITRNKSYKVETIGDAYMVVSGIPEENEYNHSRNIANTALDMRQYLTGYQIPHRPTHRVRC 1013

  Fly   586 RVGINSGPVVAGVVGMKVPRYCLFGDTVNTASRMESSSDPWMIQLSN--YTALKVQKVGYKVEAR 648
            |.|.::|.|.|||||:..|||||||||||.:|||||:..|.|||:|.  :..::.....:....|
 Worm  1014 RWGFHTGSVAAGVVGLTCPRYCLFGDTVNVSSRMESTGTPGMIQMSEEAHMHIRAHHPVFTTTER 1078

  Fly   649 GFVKVKGKGEMETYWL 664
            |.|:|||||...|:||
 Worm  1079 GEVQVKGKGTCRTFWL 1094

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc89DbNP_650551.1 HNOB 2..161 CDD:400167 22/101 (22%)
HNOBA 218..479 CDD:400168 61/304 (20%)
Nucleotidyl_cyc_III 488..665 CDD:416391 69/187 (37%)
gcy-18NP_502449.2 Periplasmic_Binding_Protein_Type_1 87..448 CDD:299141
ANF_receptor 87..395 CDD:279440
PKc_like 549..846 CDD:304357 63/372 (17%)
HNOBA <857..903 CDD:285003 14/48 (29%)
CYCc 882..1073 CDD:214485 64/197 (32%)
Guanylate_cyc 909..1095 CDD:278633 69/190 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.