DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gyc89Da and gcy-11

DIOPT Version :9

Sequence 1:NP_001036718.1 Gene:Gyc89Da / 42001 FlyBaseID:FBgn0038435 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001359843.1 Gene:gcy-11 / 181745 WormBaseID:WBGene00001537 Length:1168 Species:Caenorhabditis elegans


Alignment Length:666 Identity:157/666 - (23%)
Similarity:261/666 - (39%) Gaps:214/666 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 MQLTNMDDNGAVILYRSSRTG---------MSKYL-IGQMTEVAREFYGLEIKAYVIESQNDISG 173
            :||.:|...|      |||.|         .|:|. .|.:......||...|:...|. :|.:..
 Worm   560 VQLVDMTKFG------SSRGGSMIQSAMSMRSQYEDSGPVGGATMNFYTNGIRKAAIR-RNQMQR 617

  Fly   174 GTAGPIKLTDGPLTVIVKYRLDFDNREYMAKRVNTEAHPSQLKMPTVKLDVFLDLFP-------- 230
            ...||....|..|.::..:...::|.....:::|    .:|||: |.::...:||..        
 Worm   618 SDKGPAANRDEWLEIVDWHLAKYENTLVTVRKIN----KTQLKL-TREMKQEIDLLMNETHENLN 677

  Fly   231 --FTFVLNHDMKITHAGEKIVETWIMHNPGANPKSFIGTHVMDLFQCRRPKDTTIDWDTLIQMRA 293
              |..:...|:..|           :|:.|  |:.    .:|||.   |..|..:|     :|..
 Worm   678 RFFGLINESDLIFT-----------IHSYG--PRK----SLMDLL---RNDDLRLD-----RMFK 717

  Fly   294 VLFEFELI----------RTGH------NRAAYDAVLNMDFENY--DEMDLNEAQT--------- 331
            |.|..:::          :.|:      :....||...:...||  :::.:.|.::         
 Worm   718 VSFVEDVVKGLQFLHEGSKIGYHGNLKSSNCIVDAYWRIKLSNYGMEQIRVEEPESKPDDLLWFA 782

  Fly   332 ---------------MALAKAQEFS----------ESHPVDDDESAREDEI-------------- 357
                           :.||||..:|          ...|..|| ....|||              
 Worm   783 PEIIRRYAVKHDLSKLELAKADIYSLAIVLYEIYGRQGPFGDD-LLDSDEIIEQLKFPDGGALTR 846

  Fly   358 -----------------------DPATGERRSSQGLRSIL------LKGQMFYIKDVDSLIFLCS 393
                                   |||:  |.|.:.:|.:|      |||.:     .|:::.|  
 Worm   847 PDIHLITKAPYPLASVVEKCWVEDPAS--RPSIKKVRELLKPLSKGLKGNI-----ADNIMNL-- 902

  Fly   394 PLIENLDELHGIGLYLNDLNPHGLSRELVMAGWQHCSKLEIMFEKEEQRSDELEKSLELADSWKR 458
                 ||.      |.|:|.                   :::.|:.||..||           ::
 Worm   903 -----LDR------YRNNLE-------------------DVIKERTEQLEDE-----------RK 926

  Fly   459 QGDELLYSMIPRPIAERMRLSEEQVCQSFEEVSVIFLEVMNVYDEGLNSIQGAMQTVNTLNKVFS 523
            :.:.||..::|:.:|..::..:....:.::.||:.|.:::..  ..|:|....:|.||.||.:::
 Worm   927 RNESLLLQLLPKSVANSLKNGQPVDAEFYDSVSIYFSDIVGF--TALSSKSTPLQVVNMLNNLYT 989

  Fly   524 ALDEEIISPF-VYKVETVGMVYMAVSGAPDVNP-LHAEHACDLALRVMKKFKAHDMG-----DVA 581
            ..| .||..| .|||||:|..||.|||.|:||. |||......:|.::...|...:.     .:.
 Worm   990 NFD-TIIDKFDCYKVETIGDAYMFVSGLPEVNSYLHAGEVASASLELLDSIKTFTVSHCPDEKLR 1053

  Fly   582 IRVGINSGPVVAGVVGQKVPRYCLFGDTVNTASRMESSSDPWKIQLSKYTGDKVRQV-GYKVESR 645
            :|:|.::||||.||||.::||||||||||..|:.||||.:|.:||:|....:.:.:. ||..|.|
 Worm  1054 LRIGNHTGPVVTGVVGIRMPRYCLFGDTVIIANMMESSGEPMRIQISSDAYELILKCGGYVTEQR 1118

  Fly   646 GTVQVKGKGDMETYWL 661
            ..:.:|.|.::.|||:
 Worm  1119 EKIVLKNKLEVMTYWM 1134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc89DaNP_001036718.1 HNOB 2..161 CDD:285002 13/51 (25%)
HNOBA 218..476 CDD:285003 61/362 (17%)
CYCc 457..643 CDD:214485 68/193 (35%)
Guanylate_cyc 485..662 CDD:278633 71/185 (38%)
gcy-11NP_001359843.1 Periplasmic_Binding_Protein_type1 <234..452 CDD:385651
PKc_like 640..890 CDD:389743 47/282 (17%)
CYCc 923..1116 CDD:214485 70/206 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.