DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gyc89Da and odr-1

DIOPT Version :10

Sequence 1:NP_001036718.1 Gene:Gyc89Da / 42001 FlyBaseID:FBgn0038435 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001362115.1 Gene:odr-1 / 181479 WormBaseID:WBGene00003848 Length:1047 Species:Caenorhabditis elegans


Alignment Length:382 Identity:111/382 - (29%)
Similarity:165/382 - (43%) Gaps:82/382 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   340 FSESHPVDDDESAREDEIDPATGERRSSQGLRSILLKGQMFYIKDVDSLIFLCSPLIENLDELHG 404
            |...|..:.|:|.::    |....|.|.:|  .|...|.:||:            ::|..|..|.
 Worm   659 FPPEHIREYDDSGKQ----PPRVVRGSPKG--DIYCVGMIFYM------------MVEREDPYHL 705

  Fly   405 I--------GLYLNDLNPHGLSR------------ELVMAGWQH--------------------C 429
            |        .|....||.:.:.|            |:....|..                    .
 Worm   706 IHSVERPNATLIKQILNENHMPRITDDYRQENMLLEMCKECWDRNPDKRPTIKKLIESISTVYPL 770

  Fly   430 SK---LEIMFEKEEQRSDELE-----KSLELADSWKRQGDELLYSMIPRPIAERMRLSEEQVCQS 486
            ||   ::.|....|:.:||||     ::.:|||: :.|...||..|:|..||:.::.......:|
 Worm   771 SKGNLVDQMIRMSEKYADELEQMVAIRTADLADA-QMQTMRLLNEMLPASIAKDLKNGLIMPPRS 834

  Fly   487 FEEVSVIFLEVMNVYDEGLNSIQGAMQTVNTLNKVFSALDEEIISPFVYKVETVGMVYMAVSGAP 551
            :|..:|:|:::.:.  ..|.......|.:..||.::...|..|.....|||||.|..||..||.|
 Worm   835 YESATVMFVQICDF--NALMKRSSPEQVIAFLNDIYDQFDTVIKRHDAYKVETTGETYMVASGVP 897

  Fly   552 DVNP-LHAEHACDLALRVMK----KFKAHDMG-DVAIRVGINSGPVVAGVVGQKVPRYCLFGDTV 610
            ..|. .|.....:::|.:.:    ....||.. .:.||:|.::||:.|||:|.:.||||||||||
 Worm   898 HENEGRHIFEVAEISLEIREISYIYVLQHDKNYKLRIRIGFHAGPIAAGVIGIRSPRYCLFGDTV 962

  Fly   611 NTASRMESSSDPWKIQLSKYTG----DKVRQVGYKVESRGTVQVKGKGDMETYWLLE 663
            |.||||:|:..|.:||.|:.|.    |...   ||...||.|.|||||::..|||.|
 Worm   963 NFASRMQSNCPPNQIQTSEITARLLFDSHE---YKFVKRGIVHVKGKGEVNCYWLNE 1016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc89DaNP_001036718.1 HNOB 2..161 CDD:462233
HNOBA 218..476 CDD:462234 40/183 (22%)
Nucleotidyl_cyc_III 485..662 CDD:448371 69/186 (37%)
odr-1NP_001362115.1 Periplasmic_Binding_Protein_type1 63..378 CDD:471960
PK_GC 495..768 CDD:270894 22/126 (17%)
CYCc 803..996 CDD:214485 67/198 (34%)
Blue background indicates that the domain is not in the aligned region.

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