DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gyc89Da and gcy-12

DIOPT Version :10

Sequence 1:NP_001036718.1 Gene:Gyc89Da / 42001 FlyBaseID:FBgn0038435 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_494995.2 Gene:gcy-12 / 173902 WormBaseID:WBGene00001538 Length:1679 Species:Caenorhabditis elegans


Alignment Length:640 Identity:153/640 - (23%)
Similarity:262/640 - (40%) Gaps:180/640 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 IMRFTYPKMKSPSMQLTNMDDNG--AVILYRSSRTGMSKYLIGQ-----MTEVAREFYGLEIKAY 163
            :|:|.  |.|:|......:...|  .:..|:.:..|:...:.|:     ..|..:|...:...|:
 Worm   661 VMQFA--KTKTPWWSKAPVQGTGMRGLASYKGTLVGLKDLMYGRKPKDLTREAKKELRAMRQLAH 723

  Fly   164 VIESQNDISGGTAGPIKLTDGPLTVIVKYRLDFDNREYMAK-RVNTEAHPSQLKMPTVKLDVFLD 227
              .:.|:..|     |.:....:||:         |||.:| .::.......||:..:.:..|:|
 Worm   724 --PNVNNFLG-----IIVCQYSVTVV---------REYCSKGSLHDILRNENLKLDHMYVASFVD 772

  Fly   228 LFPFTFVLNHDMKITHAGEKIVETWIMHNPGANPKSFIGTHVMDLFQCRRPKDTTIDWDTLIQMR 292
            ......|..||.::.           ||   .|.||                     .:.||..|
 Worm   773 DLVKGMVYIHDSELK-----------MH---GNLKS---------------------TNCLITSR 802

  Fly   293 AVL----FEFELIRTGHNRAAYDAVLNMDFENY-----DEMDLN-------------EAQTMALA 335
            ..|    |....:|.|   ..||:..|: :||:     :.|.:|             :|.:..:.
 Worm   803 WTLQIADFGLRELREG---IMYDSSYNI-WENFLWTAPEAMTINGSLAISNPPTPKADAYSFGII 863

  Fly   336 KAQEFSESHP---------VDDDESAREDEIDPATGERRSSQGLRSILLKGQMFYIKDVDSLIFL 391
            ..:.|:...|         |:.:.:.::|.::                                 
 Worm   864 FHEIFTREGPYKIYVQRGDVNGEAAPKKDSVE--------------------------------- 895

  Fly   392 CSPLIENLDELHGIGLYL----NDLNPHGLSRELVMAGWQH-----------CSKLE-------- 433
            |..|:|..........|.    :||......:|::.|.|.|           .:||:        
 Worm   896 CRALVEKTVRRVYSDPYFRPDTSDLEVQNYVKEVMAACWHHDPYQRPEFKTIKNKLKPLFHQIYK 960

  Fly   434 --------IMFEKEEQRSDEL--EKSLELADSWKRQGDELLYSMIPRPIAERMRLSEEQVCQSFE 488
                    :|.||.:.:.::|  |:::||.|. :|:...||..|:|..:||::...::.:.::|.
 Worm   961 QNIMDHMVLMMEKYQTQLEDLVDERTIELKDE-QRRSQHLLQRMLPSSVAEQLLAGQDVIPEAFP 1024

  Fly   489 EVSVIFLEVMNVYDEGLNSIQG---AMQTVNTLNKVFSALDEEIISPFVYKVETVGMVYMAVSGA 550
            .|::.|.:::     |..:|.|   .|:.|..|||:::..|..|....||||||:|..||.|||.
 Worm  1025 PVTIYFSDIV-----GFTTISGESTPMEVVTFLNKLYTLFDSIIRRYDVYKVETIGDAYMVVSGV 1084

  Fly   551 PDVNPL--HAEHACDLALRVMKKFKAHDM-----GDVAIRVGINSGPVVAGVVGQKVPRYCLFGD 608
            |....:  |||....:|:.::...::..:     ..:.||:|:::||.||||||:.:|||.||||
 Worm  1085 PQYKTMEYHAEQIAMMAIHILSAVRSFSIPHRSCEPLMIRIGMHTGPCVAGVVGKTMPRYTLFGD 1149

  Fly   609 TVNTASRMESSSDPWKIQLSKYTGDKVRQV--GYKVESRGTVQVKGKGDMETYWL 661
            ||||||||||:.:..:|..|..|...:..:  |:.:|.||::.:||||.|.||||
 Worm  1150 TVNTASRMESNGEALRIHCSSSTQKVLTSIDQGFLLEERGSLAIKGKGQMTTYWL 1204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc89DaNP_001036718.1 HNOB 2..161 CDD:462233 11/61 (18%)
HNOBA 218..476 CDD:462234 56/321 (17%)
Nucleotidyl_cyc_III 485..662 CDD:448371 74/189 (39%)
gcy-12NP_494995.2 Periplasmic_Binding_Protein_type1 140..527 CDD:471960
PK_GC-A_B 648..957 CDD:270944 64/385 (17%)
CYCc 991..1183 CDD:214485 69/197 (35%)
Blue background indicates that the domain is not in the aligned region.

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