DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gyc89Da and gc2

DIOPT Version :9

Sequence 1:NP_001036718.1 Gene:Gyc89Da / 42001 FlyBaseID:FBgn0038435 Length:667 Species:Drosophila melanogaster
Sequence 2:XP_021333059.1 Gene:gc2 / 140425 ZFINID:ZDB-GENE-011128-8 Length:1120 Species:Danio rerio


Alignment Length:814 Identity:189/814 - (23%)
Similarity:300/814 - (36%) Gaps:249/814 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYGMLYESV---QHYVQEEYGVDIWRKVCHIIDCKHNSFKTHQIYPDKLMPDIAEALSACTGESF 62
            ::|.:|.|:   .|.||.......|....:|.....|.              :.:..|:....|.
Zfish   354 LFGTIYSSIVFMAHAVQSVRAAGQWMSGGNIAQNARNL--------------LFKGGSSLQANSS 404

  Fly    63 DFCMNFFGRCFVRFFSNFGYD-----------KMIRSTGRYFCDFLQSIDNIHLIMRFTY---PK 113
            ||.|..:   .:.....|.::           .|:|..||:          ||    |.|   |:
Zfish   405 DFGMLDY---VILDTDGFSWELQPTYRIEMQTDMVRFLGRH----------IH----FPYAGPPR 452

  Fly   114 MKSPSMQLTNMDDNGAVILYRSSRTGMSKYLIGQMTEVAREFYGLEIK-AYVIESQNDISGGTAG 177
            ..|.......:...|.|.|:..    :|.:|:|.:      |..|.|. :|.|..:       ..
Zfish   453 TDSSCWFTHGIICRGGVNLFHM----ISMFLLGFL------FIFLSIGCSYCIRRK-------IN 500

  Fly   178 PIKLTDGPLTVIV---------------KYRLD----FDNREYMAKRVNTEAHPSQLK------- 216
            .|:|..||..:::               |..:|    .|.|..:::|.......||..       
Zfish   501 KIRLVRGPNKILLTLNDVTFINPSLSNKKLSVDDSKASDTRMSISERSLVSPMSSQSPATYENSN 565

  Fly   217 ----------MPTVKLDVFLDLFPFT---FVLNHDMKITHAGEKIVETWIMHNPGANPKSFIG-T 267
                      |..:....|..:.|.|   |.|..|::               :...||  |:| .
Zfish   566 VAIYEGDWAWMKRLPYGTFRSITPNTSDVFELMKDLR---------------HENINP--FLGFF 613

  Fly   268 HVMDLFQ-----CRRPK--------DTTIDWDTLIQMRAVLFEFELI------------------ 301
            |...:|.     |.|..        |..:||         :|:..||                  
Zfish   614 HDCGVFAIVTEFCSRGSLEDLLVNDDVKLDW---------MFKSSLILDLIKGMKYLHHRNVCHG 669

  Fly   302 RTGHNRAAYDA--VLNMDFENYDEMDLNEAQTMALAKAQEFSESHPVDDDESAREDEIDPATGER 364
            |........|.  ||.:....|:|          :.::|.|....|..:|......||     .|
Zfish   670 RLKSRNCVVDGRFVLKITDYGYNE----------VLESQRFPYIEPPAEDLLWTAPEI-----LR 719

  Fly   365 RSSQGL---------------RSILLKGQMFYIKD--VDSLIF-------LCSPLIE-------- 397
            .|..||               :.::::|..|.:.:  .|.::.       :|.|::.        
Zfish   720 GSYPGLHGTHSGDVYSFSIIMQEVVMRGPPFCMLENTFDEIVQKVRKPPPMCRPIVSPDHAPMEC 784

  Fly   398 ----------------NLDELHGIGLYLNDLNPHGLSRELVMAGWQHCSKLEIMFEKEEQRSDEL 446
                            ..||:......:|......:...::....|:.|.||   |...:|::||
Zfish   785 IQLMKQCWNEQPEKRPTFDEIFDQFKNVNKGKKTNIIDSMLRMLEQYSSNLE---ELIRERTEEL 846

  Fly   447 EKSLELADSWKRQGDELLYSMIPRPIAERMRLSEEQVCQSFEEVSVIFLEVMNVYDEGLNSIQGA 511
            |  :|     |::.::||..|:|..:||.::|......:.||.||:.|.:::.......||  ..
Zfish   847 E--IE-----KQKTEKLLTQMLPPSVAEALKLGTTVEPEHFESVSLYFSDIVGFTTISANS--EP 902

  Fly   512 MQTVNTLNKVFSALDEEIISPFVYKVETVGMVYMAVSGAPDVN-PLHAEHACDLALRVMK---KF 572
            ::.|:.||.:::..|..|.:..||||||:|..||..||.|..| ..||....::||.::.   .|
Zfish   903 IEVVDLLNDLYTTFDAVIGNHDVYKVETIGDAYMVASGVPVPNGNRHAAEIANMALDILSAVGTF 967

  Fly   573 KAHDMGD--VAIRVGINSGPVVAGVVGQKVPRYCLFGDTVNTASRMESSSDPWKIQLSKYTGDKV 635
            :...|.|  |.||:|:::||.||||||..:||||||||||.|||||||:..|::|.:...|...:
Zfish   968 RMRHMPDVPVRIRIGLHTGPCVAGVVGLTMPRYCLFGDTVTTASRMESTGLPYRIHVHSSTVKIL 1032

  Fly   636 RQ--VGYKVESRGTVQVKGKGDMETYWLLEGPEG 667
            .:  :||:||.|...::|||...|||| |.|.:|
Zfish  1033 MELKLGYRVELRARTELKGKRIEETYW-LTGRDG 1065

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc89DaNP_001036718.1 HNOB 2..161 CDD:285002 33/175 (19%)
HNOBA 218..476 CDD:285003 61/342 (18%)
CYCc 457..643 CDD:214485 74/193 (38%)
Guanylate_cyc 485..662 CDD:278633 76/184 (41%)
gc2XP_021333059.1 PBP1_sensory_GC_DEF_like 59..440 CDD:107366 17/102 (17%)
PK_GC-2D 551..815 CDD:270945 47/304 (15%)
HNOBA <824..869 CDD:311573 17/54 (31%)
CYCc 848..1040 CDD:214485 74/198 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.