DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gyc89Da and gucy1a1

DIOPT Version :9

Sequence 1:NP_001036718.1 Gene:Gyc89Da / 42001 FlyBaseID:FBgn0038435 Length:667 Species:Drosophila melanogaster
Sequence 2:XP_002933521.3 Gene:gucy1a1 / 100496677 XenbaseID:XB-GENE-983418 Length:700 Species:Xenopus tropicalis


Alignment Length:659 Identity:156/659 - (23%)
Similarity:261/659 - (39%) Gaps:202/659 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VQHYVQEEYGVDIWRKVCHIIDCKH-------------NSFKTHQIYPDKLMPDIAEALSACTGE 60
            |:| |:|..|.:::| :|:..| :|             |||.||.....:     :..|..|:| 
 Frog   147 VEH-VKETLGDELFR-ICYEED-EHVLQVVAGTLKDFLNSFGTHLKQSGQ-----SRTLEECSG- 202

  Fly    61 SFDFCMNFFGRCFVRFFSNFGYDKMIRSTGRYFCDFLQSIDNIHLIMRFTYPKMKSPSMQLTNMD 125
                                      ...|...|  |:. |..:|.:.:.:|...:| :.|..:.
 Frog   203 --------------------------LEEGSILC--LEK-DQDYLNVYYFFPNNITP-LILPGII 237

  Fly   126 DNGAVILYRSSRTGMSKYLIGQMTEVAREFYGLEIKAYVIESQNDISGGTAGPIKLTDGPLTVIV 190
            ...|.||:.:                       |::..:|            |...:||.     
 Frog   238 RAAACILFET-----------------------EVEVRLI------------PHSCSDGN----- 262

  Fly   191 KYRLDFDNREYMAKRV---NTEAHPSQLKMPT---VKLDVFLDLFPFTFVLNHDMKITHAGEKIV 249
                ||....|:...|   ||....|..|..:   :...:|...|||.|:.:.||.:..      
 Frog   263 ----DFIKEPYLLYSVQVKNTRPSLSPSKPQSYVVIPASIFCKTFPFHFMFDKDMTMLQ------ 317

  Fly   250 ETWIMHNPGANPKSFIGTHVMDLFQCRR-PKDTTIDWDTLIQMRAVLFEFELIRTGHNRAAYDAV 313
                           ||..|..|...|. |:.:|.:....|....:...|..|.|         :
 Frog   318 ---------------IGNGVKRLLNWRDIPRKSTFEEYFEILSPKISCTFSGILT---------M 358

  Fly   314 LNMDFENYDEMDLNEAQTMALAKAQEFSESHPVDDDESAREDEIDPATGERRSSQGLRSILLKGQ 378
            |||.|                                     .|...|.:..:.|..:::.||||
 Frog   359 LNMQF-------------------------------------VIRVKTWDSTTDQTSKAMNLKGQ 386

  Fly   379 MFYIKDVDSLIFLCSPLIENLDELHGIGLYLNDLNPHGLSRELVMAGWQHCSKLEIMFEKEEQRS 443
            |.|:.:..:::||.||.::.|::..|.||||:|:..|...|::|:.|.|..::     :..::|.
 Frog   387 MIYVFESSAILFLGSPCVDRLEDFTGQGLYLSDIPIHNALRDVVLTGEQARAQ-----DGLKKRL 446

  Fly   444 DELEKSLELA----DSWKRQGDELLYSMIPRPIAERMRLSEEQVCQSFEEVSVIFLEVMNVYDEG 504
            .:|:.:||.|    :..|::..:||:|:.|..:|:::...|....:.|..|:::|.:::     |
 Frog   447 GKLKATLEQAHQALEEEKKKTVDLLFSIFPGEVAQQLWQGETVQAKKFNNVTMLFSDIV-----G 506

  Fly   505 LNSI---QGAMQTVNTLNKVFSALDEEIISPFVYKVETVGMVYMAVSGAPDVNPLHAE---HACD 563
            ..:|   ...||.:..|:::::..|.:.....||||||:|..|....|      ||.|   ||..
 Frog   507 FTAICSHCSPMQVITMLSELYTLFDFQCGELDVYKVETIGDAYCVAGG------LHKESETHAFQ 565

  Fly   564 LALRVMKKFKAHD-----MGD-VAIRVGINSGPVVAGVVGQKVPRYCLFGDTVNTASRMESSSDP 622
            :||..:|..:..|     .|: :.:|:|::||.|||||||.::|||||||:.|..|::.||.|.|
 Frog   566 VALMALKMMELSDEVMSPHGEQIKMRIGLHSGSVVAGVVGVRMPRYCLFGNNVTLANKFESCSVP 630

  Fly   623 WKIQLSKYT 631
            .||.:|..|
 Frog   631 RKINVSPTT 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc89DaNP_001036718.1 HNOB 2..161 CDD:285002 29/164 (18%)
HNOBA 218..476 CDD:285003 58/265 (22%)
CYCc 457..643 CDD:214485 63/187 (34%)
Guanylate_cyc 485..662 CDD:278633 56/159 (35%)
gucy1a1XP_002933521.3 HNOBA 294..483 CDD:400168 58/260 (22%)
Guanylate_cyc 489..676 CDD:306677 56/162 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D245586at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.