DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN5 and RPN8

DIOPT Version :9

Sequence 1:NP_477442.1 Gene:CSN5 / 42000 FlyBaseID:FBgn0027053 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_014904.3 Gene:RPN8 / 854435 SGDID:S000005787 Length:338 Species:Saccharomyces cerevisiae


Alignment Length:118 Identity:33/118 - (27%)
Similarity:53/118 - (44%) Gaps:5/118 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 IKISALALLKMVMHARSGGTLE---VMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEY 113
            :.|:.|.||..:.|.....|.|   .:|::||....:|:.|.::||||.|..|...:.....:.|
Yeast     8 VTIAPLVLLSALDHYERTQTKENKRCVGVILGDANSSTIRVTNSFALPFEEDEKNSDVWFLDHNY 72

  Fly   114 MTAYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIV 166
            :....|..|::...|..:|||||.|....  |.:.::......|...|.:.||
Yeast    73 IENMNEMCKKINAKEKLIGWYHSGPKLRA--SDLKINELFKKYTQNNPLLLIV 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN5NP_477442.1 MPN_RPN11_CSN5 41..305 CDD:163700 33/118 (28%)
RPN8NP_014904.3 MPN_RPN7_8 6..303 CDD:163693 33/118 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1310
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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