DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN5 and STAMBPL1

DIOPT Version :10

Sequence 1:NP_477442.1 Gene:CSN5 / 42000 FlyBaseID:FBgn0027053 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_065850.1 Gene:STAMBPL1 / 57559 HGNCID:24105 Length:436 Species:Homo sapiens


Alignment Length:138 Identity:35/138 - (25%)
Similarity:58/138 - (42%) Gaps:26/138 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 LEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVGRMEH-----AV 131
            :|..|::.||:..|...:          |...|..|:...:|..  ||..:|:..::.     .:
Human   291 IETCGILCGKLTHNEFTI----------THVIVPKQSAGPDYCD--MENVEELFNVQDQHDLLTL 343

  Fly   132 GWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDP-------VRTVSAGKVCLGAFRTYPKG 189
            ||.|:||....:||.:|:.|....|......:|||..|       .|..:||.:.:.|.:  .||
Human   344 GWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACK--KKG 406

  Fly   190 YKPPNEEP 197
            :.|..:||
Human   407 FHPHTKEP 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN5NP_477442.1 MPN_RPN11_CSN5 41..305 CDD:163700 35/138 (25%)
STAMBPL1NP_065850.1 USP8_dimer 28..132 CDD:462647
GBP_C <120..198 CDD:293879
MPN_AMSH_like 266..436 CDD:163697 35/138 (25%)
JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182 347..360 5/12 (42%)
Blue background indicates that the domain is not in the aligned region.

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