DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN5 and CSN6

DIOPT Version :9

Sequence 1:NP_477442.1 Gene:CSN5 / 42000 FlyBaseID:FBgn0027053 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_524451.1 Gene:CSN6 / 42661 FlyBaseID:FBgn0028837 Length:341 Species:Drosophila melanogaster


Alignment Length:279 Identity:54/279 - (19%)
Similarity:98/279 - (35%) Gaps:95/279 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 IKISALALLKMVMH-----ARSGGTLEVMGLMLGKVEDNTMIVMDAFALPVE--GTETRVNAQAQ 109
            |.:..|.::.:..|     |:.|...:|.|.::||.:...:.:|::|.|..:  |.||.:|.   
  Fly    54 ISLHPLVIMNISEHWTRFRAQHGEPRQVYGALIGKQKGRNIEIMNSFELKTDVIGDETVINK--- 115

  Fly   110 AYEYMTAYMEAAKEVGRMEHAVGWYHS--HPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDPVRT 172
              :|.....:..|:|......:|||.:  :|      :..|:..|                  |.
  Fly   116 --DYYNKKEQQYKQVFSDLDFIGWYTTGDNP------TADDIKIQ------------------RQ 154

  Fly   173 VSAGKVCLGAFRTYPKGYKPPNEEPSEYQTIPLNKIEDFGVHCKQYYPLEISYFKSALDRRLLDS 237
            ::|                 .||.|...|..||::..|       :.||::  |:|.:|  |:|.
  Fly   155 IAA-----------------INECPIMLQLNPLSRSVD-------HLPLKL--FESLID--LVDG 191

  Fly   238 LWNKYWVNTLGSSGLLTNTEYTTGQIMDLSEKLEQSENFLGRGTDVNEKRSEDKLSKATRDCSRS 302
                      .::.|.....||.                   .|:..|:...|.:::.|.:.|..
  Fly   192 ----------EATMLFVPLTYTL-------------------ATEEAERIGVDHVARMTSNESGE 227

  Fly   303 TIELIHGLMAQIVKDKLFN 321
            ...:...|:||....|:.|
  Fly   228 KSVVAEHLVAQDSAIKMLN 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN5NP_477442.1 MPN_RPN11_CSN5 41..305 CDD:163700 49/261 (19%)
CSN6NP_524451.1 MPN_CSN6 52..335 CDD:163694 54/279 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1310
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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