DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN5 and cops5

DIOPT Version :9

Sequence 1:NP_477442.1 Gene:CSN5 / 42000 FlyBaseID:FBgn0027053 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_989109.1 Gene:cops5 / 394714 XenbaseID:XB-GENE-952827 Length:334 Species:Xenopus tropicalis


Alignment Length:326 Identity:243/326 - (74%)
Similarity:287/326 - (88%) Gaps:5/326 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SDAAQKTWELENNIQTLPSCDEIFRYDAEQQRQIIDAKPWEKDPHFFKDIKISALALLKMVMHAR 67
            |..|||||||.||:|.:.|.|||::||.:||::|:.||||.||.|:||..|:|||||||||||||
 Frog     6 SSVAQKTWELSNNMQEVQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKVSALALLKMVMHAR 70

  Fly    68 SGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVGRMEHAVG 132
            |||.|||||||||||:..|||:||:||||||||||||||||.|||||.||:|.||:|||:|:|:|
 Frog    71 SGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIG 135

  Fly   133 WYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGAFRTYPKGYKPPNEEP 197
            ||||||||||||||||||||||||.:||||||:|:||.||:|||||.||||||||||||||:|.|
 Frog   136 WYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGP 200

  Fly   198 SEYQTIPLNKIEDFGVHCKQYYPLEISYFKSALDRRLLDSLWNKYWVNTLGSSGLLTNTEYTTGQ 262
            ||||||||||||||||||||||.||::||||:|||:||:.||||||||||.||.||||.:|||||
 Frog   201 SEYQTIPLNKIEDFGVHCKQYYALEVTYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQ 265

  Fly   263 IMDLSEKLEQSENFLGRGT-----DVNEKRSEDKLSKATRDCSRSTIELIHGLMAQIVKDKLFNK 322
            :.||||||||||..||||:     :.::::|||||:|||||..::|||.|||||:|::||||||:
 Frog   266 VFDLSEKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ 330

  Fly   323 V 323
            :
 Frog   331 I 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN5NP_477442.1 MPN_RPN11_CSN5 41..305 CDD:163700 207/268 (77%)
cops5NP_989109.1 MPN_RPN11_CSN5 44..314 CDD:163700 208/269 (77%)
JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182 138..151 12/12 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 195 1.000 Domainoid score I3090
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55992
Inparanoid 1 1.050 517 1.000 Inparanoid score I1259
OMA 1 1.010 - - QHG54454
OrthoDB 1 1.010 - - D1031881at2759
OrthoFinder 1 1.000 - - FOG0002867
OrthoInspector 1 1.000 - - otm48857
Panther 1 1.100 - - LDO PTHR10410
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R256
SonicParanoid 1 1.000 - - X2224
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

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