DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN5 and cops5

DIOPT Version :10

Sequence 1:NP_477442.1 Gene:CSN5 / 42000 FlyBaseID:FBgn0027053 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_957019.1 Gene:cops5 / 393698 ZFINID:ZDB-GENE-040426-1686 Length:334 Species:Danio rerio


Alignment Length:326 Identity:243/326 - (74%)
Similarity:286/326 - (87%) Gaps:5/326 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SDAAQKTWELENNIQTLPSCDEIFRYDAEQQRQIIDAKPWEKDPHFFKDIKISALALLKMVMHAR 67
            |..|.|||||.|::|.:.|.|||::||.:||::|:.||||.||.|:||..|:|||||||||||||
Zfish     4 SSIAMKTWELSNSMQEVQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKLSALALLKMVMHAR 68

  Fly    68 SGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVGRMEHAVG 132
            |||.|||||||||||:..|||:||:||||||||||||||||.|||||.||:|.||:|||:|:|:|
Zfish    69 SGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIG 133

  Fly   133 WYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGAFRTYPKGYKPPNEEP 197
            ||||||||||||||||||||||||.:||||||:|:||.||:|||||.||||||||||||||:|.|
Zfish   134 WYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGP 198

  Fly   198 SEYQTIPLNKIEDFGVHCKQYYPLEISYFKSALDRRLLDSLWNKYWVNTLGSSGLLTNTEYTTGQ 262
            ||||||||||||||||||||||.||:|||||:|||:||:.||||||||||.||.||||.:|||||
Zfish   199 SEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQ 263

  Fly   263 IMDLSEKLEQSENFLGRGT-----DVNEKRSEDKLSKATRDCSRSTIELIHGLMAQIVKDKLFNK 322
            :.||||||||:|..||||:     |.::::|||||:|||||..::|||.|||||:|::||||||:
Zfish   264 VFDLSEKLEQAEAQLGRGSFMLGLDTHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ 328

  Fly   323 V 323
            |
Zfish   329 V 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN5NP_477442.1 MPN_RPN11_CSN5 41..305 CDD:163700 208/268 (78%)
cops5NP_957019.1 MPN_RPN11_CSN5 42..312 CDD:163700 209/269 (78%)
JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182 136..149 12/12 (100%)

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