DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN5 and eIF3f2

DIOPT Version :9

Sequence 1:NP_477442.1 Gene:CSN5 / 42000 FlyBaseID:FBgn0027053 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_610210.2 Gene:eIF3f2 / 35547 FlyBaseID:FBgn0033069 Length:286 Species:Drosophila melanogaster


Alignment Length:96 Identity:18/96 - (18%)
Similarity:40/96 - (41%) Gaps:16/96 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 RSGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVGRM---- 127
            |..|..:|||.:||:.::..:.:.:.|.:|     .:.:::.:..:...||.....|:...    
  Fly    29 RPKGDNQVMGTLLGRNKEGHIEITNCFTVP-----HKEHSENKRIDLDMAYASEVLELNMFAYPN 88

  Fly   128 EHAVGWYHSHPGYGCWLSGIDVSTQMLNQTY 158
            |..:||:       |....:..|..:::..|
  Fly    89 ERVLGWF-------CTGKSVSRSASLIHDYY 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN5NP_477442.1 MPN_RPN11_CSN5 41..305 CDD:163700 18/96 (19%)
eIF3f2NP_610210.2 MPN_eIF3f 12..280 CDD:163695 18/96 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1310
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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