DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CSN5 and CG4751

DIOPT Version :10

Sequence 1:NP_477442.1 Gene:CSN5 / 42000 FlyBaseID:FBgn0027053 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_609495.1 Gene:CG4751 / 34551 FlyBaseID:FBgn0032348 Length:1412 Species:Drosophila melanogaster


Alignment Length:388 Identity:78/388 - (20%)
Similarity:129/388 - (33%) Gaps:122/388 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DAAQKTWELENNIQTLPSCDEIFRYDAEQQRQI-------IDAKPWE---KDPHFFKDIKISALA 58
            ||.:||...|..::.     .:|.::....|.:       |::.|:.   |...|...:..|||.
  Fly   233 DAERKTDTPEIVVKR-----TVFAHNTVSNRNVVHDANMLIESVPFTSVGKLQPFLITVNSSALL 292

  Fly    59 LLKMVMHARSGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKE 123
            |.....|..   ..||.|.:.|..:.||..:......|..  .||.:.|...        |..::
  Fly   293 LADFHCHLT---VREVCGYLGGTWDMNTHTLSITKTYPCR--STRFDRQRAG--------EVERD 344

  Fly   124 VGRME-----HAVGWYHSHPGYGCWLSGIDVSTQMLNQ---------TYQEPFVAIVVDPV---- 170
            :.:|.     ..||||||||.:....:..|...|:..|         || .|.|::::.|.    
  Fly   345 IQKMMIQDQLLLVGWYHSHPKFQAEPTLRDCDAQLDYQIKMRGASDLTY-TPCVSLIISPYYDEN 408

  Fly   171 RTVSAGKVCLGAFRTYPKGYKPPNEEPS----------EYQTIPLNKI-EDFGVH---CKQYYPL 221
            .|:.:...|:...        ||||...          :|..:|..:| |:....   |..||  
  Fly   409 PTLESVVKCIWIV--------PPNENRQSMEYGRPMLMQYSVLPDKEIPEEVRSEIQLCVDYY-- 463

  Fly   222 EISYFKSAL-------------DRRLLDSLWNKY-----------W------------------V 244
              |.::|.:             :.:|.::|:.|:           |                  :
  Fly   464 --SQYRSEMVKFRNIYNNDVTYNEKLKNTLYPKFPSKQSDKALWNWICAVLDCEQEDDFIPPKTI 526

  Fly   245 NTLGSSGLLTNTEYTTGQIMDLS-------EKLEQSENFLGRGTDVNEKRSEDKLSKATRDCS 300
            ..:.:..|....|.....:||||       .|.||....:|...|...|..|:..::|.:..|
  Fly   527 KIIDNDDLEVKEEDKPVVLMDLSGDVKINPPKEEQFSEAMGGLEDSGRKAEEESNAQAEQKAS 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN5NP_477442.1 MPN_RPN11_CSN5 41..305 CDD:163700 70/344 (20%)
CG4751NP_609495.1 RAMA 124..220 CDD:465856
MPN_2A_DUB 278..463 CDD:163698 46/206 (22%)
PHA03247 <616..741 CDD:223021
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.