DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN5 and Cops5

DIOPT Version :9

Sequence 1:NP_477442.1 Gene:CSN5 / 42000 FlyBaseID:FBgn0027053 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_038743.1 Gene:Cops5 / 26754 MGIID:1349415 Length:334 Species:Mus musculus


Alignment Length:328 Identity:245/328 - (74%)
Similarity:287/328 - (87%) Gaps:5/328 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SDAAQKTWELENNIQTLPSCDEIFRYDAEQQRQIIDAKPWEKDPHFFKDIKISALALLKMVMHAR 67
            |..|||||||.||:|...|.|||::||.:||::|:.||||.||.|:||..|||||||||||||||
Mouse     6 SGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHAR 70

  Fly    68 SGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVGRMEHAVG 132
            |||.|||||||||||:..|||:||:||||||||||||||||.|||||.||:|.||:|||:|:|:|
Mouse    71 SGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIG 135

  Fly   133 WYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGAFRTYPKGYKPPNEEP 197
            ||||||||||||||||||||||||.:||||||:|:||.||:|||||.||||||||||||||:|.|
Mouse   136 WYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGP 200

  Fly   198 SEYQTIPLNKIEDFGVHCKQYYPLEISYFKSALDRRLLDSLWNKYWVNTLGSSGLLTNTEYTTGQ 262
            ||||||||||||||||||||||.||:|||||:|||:||:.||||||||||.||.||||.:|||||
Mouse   201 SEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQ 265

  Fly   263 IMDLSEKLEQSENFLGRGT-----DVNEKRSEDKLSKATRDCSRSTIELIHGLMAQIVKDKLFNK 322
            :.||||||||||..||||:     :.::::|||||:|||||..::|||.|||||:|::||||||:
Mouse   266 VFDLSEKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ 330

  Fly   323 VGL 325
            :.:
Mouse   331 INV 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN5NP_477442.1 MPN_RPN11_CSN5 41..305 CDD:163700 209/268 (78%)
Cops5NP_038743.1 MPN_RPN11_CSN5 44..314 CDD:163700 210/269 (78%)
JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182 138..151 12/12 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834079
Domainoid 1 1.000 195 1.000 Domainoid score I3159
eggNOG 1 0.900 - - E1_COG1310
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55992
Inparanoid 1 1.050 516 1.000 Inparanoid score I1272
Isobase 1 0.950 - 0 Normalized mean entropy S952
OMA 1 1.010 - - QHG54454
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002867
OrthoInspector 1 1.000 - - oto94138
orthoMCL 1 0.900 - - OOG6_102889
Panther 1 1.100 - - LDO PTHR10410
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R256
SonicParanoid 1 1.000 - - X2224
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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