DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN5 and csn5

DIOPT Version :9

Sequence 1:NP_477442.1 Gene:CSN5 / 42000 FlyBaseID:FBgn0027053 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_593131.1 Gene:csn5 / 2541529 PomBaseID:SPAC1687.13c Length:299 Species:Schizosaccharomyces pombe


Alignment Length:319 Identity:132/319 - (41%)
Similarity:189/319 - (59%) Gaps:30/319 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ELENNIQTLPSCDEIFRYDAEQQRQIIDAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVM 75
            :|||          :||:|.|::|..|...||:.||.||:.:||||:|||||:.|...|..||||
pombe     4 QLEN----------VFRFDEEKERAKIRESPWKHDPEFFRSVKISAVALLKMLRHVSQGMPLEVM 58

  Fly    76 GLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVGRMEHAVGWYHSHPGY 140
            |.:.||||..::|::|:||||||||||||||..:|.||...|....|.|.|.|:.:|||||||.|
pombe    59 GYVQGKVEGASLIILDSFALPVEGTETRVNAHEEAQEYSVQYHTLCKSVYRHENVIGWYHSHPNY 123

  Fly   141 GCWLSGIDVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGAFRTYPKG-----YKPPNEEPSE- 199
            ||||||:||.||..||.||:||||:|:||.|::.:..|.:|||||||.|     .......||. 
pombe   124 GCWLSGVDVETQRQNQKYQDPFVAVVLDPKRSLESPYVNIGAFRTYPVGNDGSIRTKSRHHPSVL 188

  Fly   200 YQTIPLNKIEDFGVHCKQYYPLEISYFKSALDRRLLDSLWNKYWVNTLGSSGLLTNTEYTTGQIM 264
            ::.:|.:||||.|.|.:.||.|.|:||.|..::::.:.|.|:.|..::....:|.|.|:      
pombe   189 FKNLPSSKIEDAGAHAEAYYSLPITYFHSKAEKKVTEFLRNRNWSRSITECSILQNNEF------ 247

  Fly   265 DLSEKLEQSENFLGRGTDVNEKRSEDKLSKATRDCSRSTIELIHGLMAQI-VKDKLFNK 322
                 |..||..:..  .::|..:.:....:..:.|::....:...::|| |:||||.:
pombe   248 -----LHDSEKLIDH--LIHETGNNELPVASAYEQSKACCNELSTFLSQIDVQDKLFKE 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN5NP_477442.1 MPN_RPN11_CSN5 41..305 CDD:163700 116/269 (43%)
csn5NP_593131.1 MPN_RPN11_CSN5 24..266 CDD:163700 115/254 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 145 1.000 Domainoid score I1152
eggNOG 1 0.900 - - E1_COG1310
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 245 1.000 Inparanoid score I803
OMA 1 1.010 - - QHG54454
OrthoFinder 1 1.000 - - FOG0002867
OrthoInspector 1 1.000 - - oto101553
orthoMCL 1 0.900 - - OOG6_102889
Panther 1 1.100 - - LDO PTHR10410
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R256
SonicParanoid 1 1.000 - - X2224
TreeFam 1 0.960 - -
1312.860

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