Protein Alignment CSN5 and rpn-11

DIOPT Version :10

• Sequence 1: NP_477442.1
• Gene: CSN5 / 42000
• FlyBaseID: FBgn0027053
• Length: 327
• Species: Drosophila melanogaster
• Sequence 2: NP_494712.1
• Gene: rpn-11 / 173744
• WormBaseID: WBGene00004467
• Length: 312
• Species: Caenorhabditis elegans
• Alignment Length: 282
• Identity: 92/282 - (32%)
• Similarity: 150/282 - (53%)
• Gaps: 28/282 - (9%)

  Fly    52 IKISALALLKMVMHARSGGTLEVMGLMLGK-VEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMT 115
            :.||:||||||:.|.|:|..:||||||||: |:|.|:.|:|.||:|..||...|.|....::  .
 Worm    33 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGTGVSVEAVDPVFQ--A 95

  Fly   116 AYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCL 180
            ..::..|:.||.|..|||||||||:||||||:|::||...:...:..||:||||:::|. |||.:
 Worm    96 KMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDRAVAVVVDPIQSVK-GKVVI 159

  Fly   181 GAFRTYPKGYKPPNEEPSEYQTIPLNKIEDFGVHC------KQYYPLEISYFKSALDRRLLDSLW 239
            .||||........|:||.: .|..|..::...:..      :.||.:.|:|....|::::|.:|.
 Worm   160 DAFRTINPQSMALNQEPRQ-TTSNLGHLQKPSIQALIHGLNRHYYSIPIAYRTHDLEQKMLLNLN 223

  Fly   240 NKYWVNTLGSSGLL----TNTEYTTGQI---MDLSEKLEQSENFLGRGTDVN-------EKRSED 290
            ...|::.:......    .|.|:....:   .:..:.||..:|...:...:.       ::...|
 Worm   224 KLSWMDAVSVENYSKCGEQNKEHLKAMLKLAKNYKKALEDEKNMTDQELAIKNVGKMDPKRHIAD 288

  Fly   291 KLSKATRDCSRSTIELIHGLMA 312
            ::||...|   :.::.:.|:||
 Worm   289 EVSKMLND---NIVQSLAGMMA 307

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CSN5	NP_477442.1	MPN_RPN11_CSN5	41..305	CDD:163700	89/273 (33%)
rpn-11	NP_494712.1	MPN_RPN11_CSN5	23..288	CDD:163700	85/258 (33%)