DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN5 and mpnd

DIOPT Version :9

Sequence 1:NP_477442.1 Gene:CSN5 / 42000 FlyBaseID:FBgn0027053 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001096446.1 Gene:mpnd / 100125058 XenbaseID:XB-GENE-5858624 Length:466 Species:Xenopus tropicalis


Alignment Length:313 Identity:71/313 - (22%)
Similarity:119/313 - (38%) Gaps:81/313 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KTWELE----NNIQTLPSCDEIFRYDAEQQR-----QIIDAKPWEKDPHFFKD------------ 51
            |:..||    |.||.....|.:.|...|:.|     ..:.::...:|||...:            
 Frog   170 KSSNLEQAECNKIQCKGGTDHVHRCGQEEIRIPVKYSTLGSRDSARDPHTLVELTCFMALNKFQP 234

  Fly    52 --IKISALALLKMVMHA---RSGGTLEVMGLMLGKVEDNTMI--VMDAFALPVEGTETRVNAQAQ 109
              :.:|:.|||.:..|:   ||    ||:|.:.|:.:.|:.:  |:.||.......:|...|..:
 Frog   235 FHVSVSSNALLLLDFHSHLTRS----EVVGYLGGRWDTNSQLLSVLRAFPCRARLRDTESAAAIE 295

  Fly   110 AYEYMTAYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQ----------EPFVA 164
            ...|.:.::....       .||||||||......|..|:..||   .||          :|.:.
 Frog   296 EEIYQSLFLRGLS-------LVGWYHSHPQSPALPSLQDIEAQM---DYQLKLQGTENSFQPCIG 350

  Fly   165 IVVDPVRTVSAG---KVCLGAFRTYPKGYKPPNE-EPSEYQTIPLNKIEDFGVHCKQ-------- 217
            ::..|...::.|   .:|       |....||.| .|.:| .||:    |..|...|        
 Frog   351 MICGPYFQMNEGVESSIC-------PFWVMPPAEHRPGDY-GIPM----DVEVTYTQDSFLTNDI 403

  Fly   218 --YYPLEISYFKSALDRRLLDSLW--NKYWVNTL-GSSGLLTNTEYTTGQIMD 265
              ...:.:.::|.:.|......:|  ||.:::.| ||....|..::..|.::|
 Frog   404 LHQMMMLVEFYKGSPDLIPFQDIWKENKTYLDKLKGSLSSRTPKDHGFGPVLD 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN5NP_477442.1 MPN_RPN11_CSN5 41..305 CDD:163700 61/271 (23%)
mpndNP_001096446.1 MPN_2A_DUB 231..415 CDD:163698 47/209 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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