DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10405 and Send1

DIOPT Version :10

Sequence 1:NP_001036717.1 Gene:CG10405 / 41996 FlyBaseID:FBgn0038431 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster


Alignment Length:260 Identity:80/260 - (30%)
Similarity:116/260 - (44%) Gaps:42/260 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLIAGILVILEASRTEAAVPRQPDSRIVNGREATEGQFPYQLSLRRQTVHICGASILSSNWAITA 75
            |||:.::.:|          .:|..||:.|........|:|:||:....|.||.||.|....|||
  Fly    14 LLISPVVPVL----------LEPSERIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITA 68

  Fly    76 AHCIDGHEQQPREFTLRQGSIMRTSGGTVQPVKAIYKHPAYDRADMNFDVALLRT------ADGA 134
            ||||...|:     ::|.||.:..|||.|..|:|...||.:|:.:|..|||:|:.      :|..
  Fly    69 AHCIKEGER-----SIRAGSSLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSI 128

  Fly   135 LSLPLGKVAPIRLPTVGEAISESMPAVVSGWGHMSTSNPVLSSVLKSTTVLTVNQEKCHNDLRHH 199
            .::||.:..|   ||       |..|:.:|||..:..  :....|:...:|......|  .|::.
  Fly   129 QTIPLAETDP---PT-------SSSALATGWGRGNFL--IRPRQLQGVEILIRPLIVC--KLKYG 179

  Fly   200 GGVTEAMFCAAARNTDACQGDSGGPISAQGTLIGIVS--WGVGCADPYYPGVYTRLAHPTIRRWI 262
            .||.....||.......|.||||||:...|.|:||.|  ..:.|..   ..:|..:|.  .|.||
  Fly   180 NGVFNEDICAGRMGKGGCYGDSGGPLVFNGQLVGITSRTGNIVCLG---SSLYASVAR--YRNWI 239

  Fly   263  262
              Fly   240  239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10405NP_001036717.1 Tryp_SPc 36..262 CDD:214473 73/233 (31%)
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 73/233 (31%)

Return to query results.
Submit another query.