DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak3 and CLA4

DIOPT Version :9

Sequence 1:NP_001262638.1 Gene:Pak3 / 41995 FlyBaseID:FBgn0044826 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_014101.1 Gene:CLA4 / 855418 SGDID:S000005242 Length:842 Species:Saccharomyces cerevisiae


Alignment Length:660 Identity:217/660 - (32%)
Similarity:319/660 - (48%) Gaps:128/660 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ISEIGAPTNFQRHFHVSRNQETGDLEGLPAPWVRLM-NSQITRDEQDKNPDAAYHAVKYY-NYS- 78
            :|.:.:||||....||..:.|||...|:|..|.:|: :|:||.::.:.|..|....:::| .|: 
Yeast   181 LSGVSSPTNFTHKVHVGFDPETGSFVGMPTNWEKLLKHSRITGEDWNNNSAAVIQVLQFYQEYNG 245

  Fly    79 IKKKENEVFKPFITEDVIHEESKEIEN-YVNYKNKHKSQDPEKSDDDGSSTATETESSSGCGS-- 140
            .....|.:.||...|  .....|.:.| |.:.|.::.|.:.:.|....||..::.::|....:  
Yeast   246 AGNPTNTLDKPQSGE--TSSSQKSLPNSYNDNKLRNNSVNSKSSSGVSSSMVSQRKTSQPPNTKS 308

  Fly   141 --SAGNSNSSSINDS--SQQSTVPLDALEEV-----------------------------FKELK 172
              |.|:.:...||..  :.||.:|.. |:.|                             .:.|:
Yeast   309 PVSLGSGSLPPINTKLPTSQSNIPRH-LQNVPNQQYPKMRNGHSPTNGQFPRGPMHPNNSQRSLQ 372

  Fly   173 TNLEHRETLKAAPQE---------------PPPVPPKKSPHTI-------PPKP------QIKPK 209
            ...:.::..|...|:               |.|:.|.:..|.:       |..|      |.:..
Yeast   373 QQQQQQQQQKQQHQQYPYHHQGPSPSPSPSPSPLNPYRPHHNMINPYSKQPQSPLSSQSTQNQAI 437

  Fly   210 PRVTQKFSRTS--------------DIRRDEDSDNQHKINTDTIIIKPAVGAQDAG-------AD 253
            ||..|..|.|:              ...|.....||:.  |....::|.....|..       |.
Yeast   438 PRYAQNSSPTAAHFQPQRTAPKPPISAPRAPYPSNQNA--TSNTHVQPVAPKNDQSTPQTMRQAP 500

  Fly   254 DNPDET------ILRRSKEKRAQKTDAEIYVELRAICNSDDPRERYKTTQEVGKGASGIVFIA-- 310
            ..||..      :.:..|..|...:.|||..:|:.:..:.||.:.:|..::.|:||||.|::|  
Yeast   501 KRPDADVAQPGGVAKPKKPARPTMSTAEIMSKLKKVTVNADPSQCFKVIEKAGQGASGSVYLAER 565

  Fly   311 ADLQNES-----------------QVAVKTIDMKNQSSKDLILTEIRVLKDFNHKNLVNFLDAYL 358
            ..:..||                 :||:|.:.:..|..|:||:.||.|:||..|||:||||:|| 
Yeast   566 THIPTESNMIELINNDIDEPHVGDKVAIKQMVLSKQPRKELIVNEILVMKDSRHKNIVNFLEAY- 629

  Fly   359 LEPEDQLWVVMEYMDGGPLTDVV--------TETVMKERQIACVCRETLYAISFLHAKGIIHRDI 415
            |..:|.||||||:|:||.|||::        :.:.:.|.|||.:.|||...:.|||.|.||||||
Yeast   630 LRTDDDLWVVMEFMEGGSLTDIIENSPTNDNSHSPLTEPQIAYIVRETCQGLKFLHDKHIIHRDI 694

  Fly   416 KSDNVLLGMDGSVKVTDFGFCANI-EGDEKRQTMVGTPYWMAPEVVTRKKYGKKVDIWSIGIMAI 479
            |||||||.....||:|||||||.: :...||.||||||||||||||.:::|.:|:|:||:|||.|
Yeast   695 KSDNVLLDTRARVKITDFGFCARLTDKRSKRATMVGTPYWMAPEVVKQREYDEKIDVWSLGIMTI 759

  Fly   480 EMIEGQPPYLYETPLRALYLIAANGRPDIKSWDKLSPNLQDFLDRCLQVEVDRRATADELLSHPF 544
            ||:||:||||.|.||:||||||.||.|.:|..:.||..::.||..||.|:|..||:.:|||.|.|
Yeast   760 EMLEGEPPYLNEDPLKALYLIATNGTPKLKHPESLSLEIKRFLSVCLCVDVRYRASTEELLHHGF 824

  Fly   545 LNDCSEVKAL 554
            .|...:.|.|
Yeast   825 FNMACDPKDL 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pak3NP_001262638.1 PBD 19..73 CDD:279166 18/54 (33%)
PKc_like 288..545 CDD:304357 140/284 (49%)
S_TKc 293..545 CDD:214567 138/279 (49%)
CLA4NP_014101.1 PH_Cla4_Ste20 62..174 CDD:270097
PBD 183..241 CDD:395634 18/57 (32%)
STKc_PAK 546..826 CDD:270789 139/280 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0578
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100484
Panther 1 1.100 - - O PTHR48015
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.770

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