DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak3 and PBS2

DIOPT Version :9

Sequence 1:NP_001262638.1 Gene:Pak3 / 41995 FlyBaseID:FBgn0044826 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_012407.2 Gene:PBS2 / 853313 SGDID:S000003664 Length:668 Species:Saccharomyces cerevisiae


Alignment Length:687 Identity:155/687 - (22%)
Similarity:250/687 - (36%) Gaps:188/687 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KKKGGDGGSISEIGAPT-------NFQRHFHVSRNQETGDLEGLPAPWVRLMNSQITRDEQDKNP 65
            ::.|.|.||..:..:.|       |...|..|...||...|:       |..:....:.||||..
Yeast    23 EQTGSDNGSAVKRTSSTSSHYNNINADLHARVKAFQEQRALK-------RSASVGSNQSEQDKGS 80

  Fly    66 DAAYHAVKYYNYSIKKKENEVFKPF--------------ITEDVIHEESKE-IENYVNYKNKHKS 115
                      :.|.|..:..|.||.              ::..|:...||. ::|.::.:.....
Yeast    81 ----------SQSPKHIQQIVNKPLPPLPVAGSSKVSQRMSSQVVQASSKSTLKNVLDNQETQNI 135

  Fly   116 QDPEKSDDDGSSTATETESSSGCGS---SAGNSNSSSINDSSQQSTVPLDALEEVFKELKTNLEH 177
            .|...:.|....|||....::|..:   :...||::|....:|.              |..|   
Yeast   136 TDVNINIDTTKITATTIGVNTGLPATDITPSVSNTASATHKAQL--------------LNPN--- 183

  Fly   178 RETLKAAPQEP----PPVPPKKSPHTIP-----PKPQIK-------PKPRVTQKF-SRTSDIRRD 225
                :.||:.|    .|..|..:||..|     ||..:.       |...::.|. ::|:...:.
Yeast   184 ----RRAPRRPLSTQHPTRPNVAPHKAPAIINTPKQSLSARRGLKLPPGGMSLKMPTKTAQQPQQ 244

  Fly   226 EDSDNQHKINTDTIIIKPAVGAQDAGADDNPDETILRRSKEKRAQKTDAEIYVELRAICNSDDPR 290
            ......:|.:.:|:.....|    .|...||...|      ...|.|...        .:::.|.
Yeast   245 FAPSPSNKKHIETLSNSKVV----EGKRSNPGSLI------NGVQSTSTS--------SSTEGPH 291

  Fly   291 ERYKTTQEVG-------KGASGIVFIAA------DLQNES-------QVAVKTIDMKNQSSKDLI 335
            :...||...|       .|:||...:.|      |:::.|       .::.|.||..|.||..:.
Yeast   292 DTVGTTPRTGNSNNSSNSGSSGGGGLFANFSKYVDIKSGSLNFAGKLSLSSKGIDFSNGSSSRIT 356

  Fly   336 LTEIRVLKDFNHKN-----------------------------------------------LVNF 353
            |.|:..|.:..|.|                                               :|:|
Yeast   357 LDELEFLDELGHGNYGNVSKVLHKPTNVIMATKEVRLELDEAKFRQILMELEVLHKCNSPYIVDF 421

  Fly   354 LDAYLLEPEDQLWVVMEYMDGGPLTDVVTETV----MKERQIACVCRETLYAISFLHAK-GIIHR 413
            ..|:.:  |..:::.|||||||.|..:..|:.    :.|.|:|.:....::.:..|..: .||||
Yeast   422 YGAFFI--EGAVYMCMEYMDGGSLDKIYDESSEIGGIDEPQLAFIANAVIHGLKELKEQHNIIHR 484

  Fly   414 DIKSDNVLLGMD-GSVKVTDFGFCANIEGDEKRQTMVGTPYWMAPEVV-----TRKKYGKKVDIW 472
            |:|..|:|...: |:||:.|||...|:.. ...:|.:|...:||||.:     .|..|..:.|||
Yeast   485 DVKPTNILCSANQGTVKLCDFGVSGNLVA-SLAKTNIGCQSYMAPERIKSLNPDRATYTVQSDIW 548

  Fly   473 SIGIMAIEMIEGQ---PPYLYETPLRALYLIAANGRPDIKSWDKLSPNLQDFLDRCLQVEVDRRA 534
            |:|:..:||..|:   ||..|:.....|..|.....|.:.| ||.|.:.|||:..|||...:||.
Yeast   549 SLGLSILEMALGRYPYPPETYDNIFSQLSAIVDGPPPRLPS-DKFSSDAQDFVSLCLQKIPERRP 612

  Fly   535 TADELLSHPFL-----NDCSEVKALVPNIKAAKKVLR 566
            |...|..||:|     .|....:.:...::...|:||
Yeast   613 TYAALTEHPWLVKYRNQDVHMSEYITERLERRNKILR 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pak3NP_001262638.1 PBD 19..73 CDD:279166 12/60 (20%)
PKc_like 288..545 CDD:304357 91/337 (27%)
S_TKc 293..545 CDD:214567 90/332 (27%)
PBS2NP_012407.2 PKc_PBS2_like 358..644 CDD:132953 76/289 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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