DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak3 and pak6b

DIOPT Version :9

Sequence 1:NP_001262638.1 Gene:Pak3 / 41995 FlyBaseID:FBgn0044826 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001155959.1 Gene:pak6b / 567874 ZFINID:ZDB-GENE-041014-121 Length:607 Species:Danio rerio


Alignment Length:645 Identity:201/645 - (31%)
Similarity:301/645 - (46%) Gaps:135/645 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EIGAPTNFQRHFHVSRNQETGDLEGLPAPWVRLMNSQITRDEQDKNPDAAYHAVKYYNYSIKKKE 83
            ||..|.|||...|.|.:...|...|||..|..|:       |..|.|........:....::.::
Zfish    13 EISTPKNFQHRVHTSFDPVQGCFIGLPPQWQSLI-------ETLKRPKPVVDPSSFTQVQVRPQK 70

  Fly    84 NEVFKPFI-TEDVIHE----------------------------------ESKEIENY----VNY 109
            :.|...|| .||.|..                                  |..|.|.|    :|.
Zfish    71 SIVRGSFIGHEDYISAAIAQMSRLSVTSSNSLRRRSPSVRKRAQSLGRLGELAEAETYEYEELNN 135

  Fly   110 KNKHKSQDPEKSDDDGSSTATETESS-------------------------SGC--GSSAGNS-N 146
            .|...|.|..:......|..||:..|                         :||  ..:|||. |
Zfish   136 TNHRNSSDLHRGSRPIQSPQTESRQSPARARSVHEATMFTGLMPRDILLHRAGCEGTDNAGNKPN 200

  Fly   147 SSSINDSSQQSTVPLDALEEVFKELKTNLEHRETLKAAPQ-------EPPPVPPKKSPH-TIPPK 203
            ...::....||    |..:....:||...:.|      ||       ..|.:|....|: |..||
Zfish   201 QRPVSCLYSQS----DGAKLNSDQLKMETQRR------PQSTYDFKVNSPNLPAASKPNGTSSPK 255

  Fly   204 PQIKPKPRVTQKFSRTSDIRRDEDSDNQHKINTDTIIIKPAVGAQDAGADDNPDETILRRSKEKR 268
            |........|.:.|.|         ||..|::|....:.|        |.|:|.|.   |.....
Zfish   256 PGHGIISMQTPRRSST---------DNTLKLSTIPADVPP--------AQDSPSEP---RQAPSG 300

  Fly   269 AQK--------TDAEIYVELRAICNSDDPRERYKTTQEVGKGASGIVFIAADLQNESQVAVKTID 325
            |..        |..:....|:.:.:..|||...:...::|:|::|:|.||.:..:..|||||.:|
Zfish   301 ASSPGLTEPSVTHTQFRAALQMVVDPGDPRSYLENFIKIGEGSTGVVCIAREKHSGRQVAVKMMD 365

  Fly   326 MKNQSSKDLILTEIRVLKDFNHKNLVNFLDAYLLEPEDQLWVVMEYMDGGPLTDVVTETVMKERQ 390
            ::.|..::|:..|:.:::|:.|:|:|....:.|:  .::|||:|||:.||.||::|:||.:.|.|
Zfish   366 LRKQQRRELLFNEVVIMRDYRHQNVVEMYKSALV--GEELWVIMEYLQGGALTNIVSETRLTEEQ 428

  Fly   391 IACVCRETLYAISFLHAKGIIHRDIKSDNVLLGMDGSVKVTDFGFCANIEGD-EKRQTMVGTPYW 454
            ||.||...|.|:.:||::|:||||||||::||.:||.||::||||||.|..| .||:::||||||
Zfish   429 IATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRRSLVGTPYW 493

  Fly   455 MAPEVVTRKKYGKKVDIWSIGIMAIEMIEGQPPYLYETPLRALYLIAANGRPDIKSWDKLSPNLQ 519
            ||||||::..||.:|||||:|||.:||::|:|||..|||:.|:..:.....|..::..|:||.|:
Zfish   494 MAPEVVSKTPYGTEVDIWSLGIMVVEMVDGEPPYFSETPISAMKRLRDEPPPTARNASKISPVLR 558

  Fly   520 DFLDRCLQVEVDRRATADELLSHPFLNDCSEVKALVPNIKAAKKVLRRNVXLLCNHRTAR 579
            ||||..|..|..:|::|.:||.||||..||..:.|:|.::..::            ||:|
Zfish   559 DFLDSMLTREPQQRSSASDLLQHPFLLQCSSPRCLIPLVEQTRR------------RTSR 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pak3NP_001262638.1 PBD 19..73 CDD:279166 17/53 (32%)
PKc_like 288..545 CDD:304357 120/257 (47%)
S_TKc 293..545 CDD:214567 117/252 (46%)
pak6bNP_001155959.1 PBD 13..65 CDD:279166 17/58 (29%)
STKc_PAK6 311..607 CDD:270821 131/310 (42%)
S_TKc 338..584 CDD:214567 117/247 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0578
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D757766at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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