DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak3 and lats2

DIOPT Version :9

Sequence 1:NP_001262638.1 Gene:Pak3 / 41995 FlyBaseID:FBgn0044826 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001116779.1 Gene:lats2 / 567674 ZFINID:ZDB-GENE-050119-6 Length:1140 Species:Danio rerio


Alignment Length:605 Identity:134/605 - (22%)
Similarity:220/605 - (36%) Gaps:189/605 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 IENYVNYKNKHKSQDPEKSDDDGSSTATETESSSGCGSSAGNSNSSSINDSSQQSTVPLDALEEV 167
            :.:..|..|.|:.....::....:|.|.:.|||.|..::.....|..|..       |:.::..:
Zfish   440 VPSRTNSFNNHQKVTVRQTLPPTASVAGKPESSLGPPNTITAVTSPPIQP-------PVKSIRVM 497

  Fly   168 FKELKTNL-------------EHRETLKAAPQE------------PPPVPPK------------- 194
            ..|.||.:             |.:::|...|.|            |||..||             
Zfish   498 RPEPKTAVGPCHPGWLSAQSPEAQDSLGYIPDENFTLEPSQEHRCPPPPYPKTLLVSGSGPEPAS 562

  Fly   195 ---------------------------------------KSPHTIPPKPQIKPKPRVTQKFSRTS 220
                                                   |....:..|.||:..|...:|.:|..
Zfish   563 LEPVAMSGLQDVSATGRTIQSSSVGKQEEPIFKDKVKMGKGEKAVKDKKQIQTSPVPVRKNARDE 627

  Fly   221 DIRR---------------DEDSDN-----QHKINTDTIIIKPAVGAQDAGADDNPDETILRRSK 265
            :.|.               ::..:|     |.|:|....:.:.   ...||..:...|.:.:...
Zfish   628 EKRESRIKSYSPFAFKFYMEQHVENVMKTYQQKLNRRMQLEQE---MSKAGLSEAEQEQMRKMLY 689

  Fly   266 EK-------RAQKTDAEIYVELRAICNSDDPRERYKTTQEVGKGASGIVFIAADLQNESQVAVKT 323
            :|       |..|.|..::|:::.:                |.||.|.|.:...:...:..|:||
Zfish   690 QKESNYNRLRRAKMDKSMFVKIKTL----------------GIGAFGEVCLTRKVDTGALYAMKT 738

  Fly   324 I---DMKNQSSKDLILTEIRVLKDFNHKNLVNFLDAYLLEPEDQLWVVMEYMDGGPLTDVVTET- 384
            :   |:.|::....:..|..:|.:.:::.:|...  |..:..|.|:.||:|:.||.:..::... 
Zfish   739 LRKKDVLNRNQVAHVKAERDILAEADNEWVVRLY--YSFQDRDNLYFVMDYIPGGDMMSLLIRMG 801

  Fly   385 VMKERQIACVCRETLYAISFLHAKGIIHRDIKSDNVLLGMDGSVKVTDFGFCANIE--------- 440
            |..|........|...||..:|..|.||||||.||:|:.:||.:|:||||.|....         
Zfish   802 VFPEVLARFYVAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ 866

  Fly   441 ------------------------GD-----EKRQT----------MVGTPYWMAPEVVTRKKYG 466
                                    ||     |:|.|          :||||.::||||:.||.|.
Zfish   867 KGNHIRQDSMEPSDSWDDVSNCRCGDRLMTLEQRATRQHQRCLAHSLVGTPNYIAPEVLLRKGYT 931

  Fly   467 KKVDIWSIGIMAIEMIEGQPPYLYETPLRA-LYLIAANGRPDIKSWDKLSPNLQDFLDR-CLQVE 529
            :..|.||:|::..||:.||||:|..||..| |.:|.......:....||||...|.:.: |...|
Zfish   932 QLCDWWSVGVILFEMLVGQPPFLAPTPTEAQLKVINWENTLQVPPQVKLSPEAVDIIGQLCCSAE 996

  Fly   530 VDRRA--TADELLSHPFLND 547
             :|..  .|.|:.:|||.::
Zfish   997 -ERLGGNGAGEIKAHPFFSE 1015

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pak3NP_001262638.1 PBD 19..73 CDD:279166
PKc_like 288..545 CDD:304357 89/312 (29%)
S_TKc 293..545 CDD:214567 89/307 (29%)
lats2NP_001116779.1 UBA_LATS2 105..145 CDD:270581
Med15 175..>635 CDD:255446 32/201 (16%)
PKc_like 706..1088 CDD:304357 91/329 (28%)
S_TKc 708..1013 CDD:214567 90/323 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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