DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak3 and shk2

DIOPT Version :9

Sequence 1:NP_001262638.1 Gene:Pak3 / 41995 FlyBaseID:FBgn0044826 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_592864.1 Gene:shk2 / 2541468 PomBaseID:SPAC1F5.09c Length:589 Species:Schizosaccharomyces pombe


Alignment Length:557 Identity:200/557 - (35%)
Similarity:286/557 - (51%) Gaps:113/557 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SEIGAPTNFQRHFHVSRNQETGDLEGLPAPWVRLM-NSQITRDEQDKNPDAAYHAVKYYNYSIKK 81
            |::.:|.|.:...||..:.| |:..|||..|:.|: :|.||:.|..:.|.|...|:.:|      
pombe   127 SKVSSPMNPKHQVHVGIDNE-GNYVGLPKEWILLLQSSSITKQECMEEPKAVIQALDFY------ 184

  Fly    82 KENEVFKPFITEDVIHEESKEIENYVNYKNKHKSQDPEKSDDDGSSTATETESS-SGCGSSAGNS 145
                              ||:::                       |.:||:.| |.|..:...|
pombe   185 ------------------SKQLD-----------------------TTSETKDSFSFCKETLPRS 208

  Fly   146 N--SSSINDSSQQSTVPLDALEEVFKELKTNLEHRETLKAAPQEPPPVPPKKSPHTIPPKPQIKP 208
            :  |.||.|:.:...:....:      .|.|:..|                             .
pombe   209 STTSYSIRDADKHHKLTTSGV------TKMNITER-----------------------------C 238

  Fly   209 KPRVTQKFSRTSDIRR-DEDSDNQHKINTDTIIIKPAVGAQDAGADDNPDETILRRSKEKRAQKT 272
            ||:.|.:..:...||. .||..:...|.|..:...|      ..||..  .|:.||       .|
pombe   239 KPKTTIQTDKKHIIRPFIEDKSHVESIMTGKVTKVP------VKADSK--NTLSRR-------MT 288

  Fly   273 DAEIYVELRAICNSDDPRERYKTTQEVGKGASGIVFIAADLQNE-----SQVAVKTIDMKNQSSK 332
            |.:....|:....|.||.|.:....::|:||||.|::|..:..:     ..||:|:||::.|:.|
pombe   289 DRQALAMLKDSVTSHDPVEYFNVKHKLGQGASGSVYLAKVVGGKQLGIFDSVAIKSIDLQCQTRK 353

  Fly   333 DLILTEIRVLKDFNHKNLVNFLDAYLLEPEDQLWVVMEYMDGGPLTDVVTETVMKERQIACVCRE 397
            :|||.||.|:::..|.|:|.:||::|:. |..||||||||:.|.|||::.::.:.|.|||.:|.|
pombe   354 ELILNEITVMRESIHPNIVTYLDSFLVR-ERHLWVVMEYMNAGSLTDIIEKSKLTEAQIARICLE 417

  Fly   398 TLYAISFLHAKGIIHRDIKSDNVLLGMDGSVKVTDFGFCANIEG-DEKRQTMVGTPYWMAPEVVT 461
            |...|..|||:.|||||||||||||...|::|:|||||||.:.. ..||.||||||||||||||.
pombe   418 TCKGIQHLHARNIIHRDIKSDNVLLDNSGNIKITDFGFCARLSNRTNKRVTMVGTPYWMAPEVVK 482

  Fly   462 RKKYGKKVDIWSIGIMAIEMIEGQPPYLYETPLRALYLIAANGRPDIKSWDKLSPNLQDFLDRCL 526
            :.:||.||||||:|||.|||||.:||||.|.|:|||||||.||.|.:|..:.:|.||:.||:.||
pombe   483 QNEYGTKVDIWSLGIMIIEMIENEPPYLREDPIRALYLIAKNGTPTLKKPNLVSKNLKSFLNSCL 547

  Fly   527 QVEVDRRATADELLSHPFLNDC---SEVKALVPNIKA 560
            .::...||||.|||:|.|||..   .::|:::.:.||
pombe   548 TIDTIFRATAAELLTHSFLNQACPTEDLKSIIFSRKA 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pak3NP_001262638.1 PBD 19..73 CDD:279166 18/54 (33%)
PKc_like 288..545 CDD:304357 139/262 (53%)
S_TKc 293..545 CDD:214567 136/257 (53%)
shk2NP_592864.1 PH_Cla4_Ste20 24..120 CDD:270097
PBD 128..182 CDD:279166 18/54 (33%)
STKc_PAK 308..567 CDD:270789 137/259 (53%)
S_TKc 309..566 CDD:214567 136/257 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0578
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000763
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100484
Panther 1 1.100 - - O PTHR48015
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.770

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