DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak3 and gck-3

DIOPT Version :9

Sequence 1:NP_001262638.1 Gene:Pak3 / 41995 FlyBaseID:FBgn0044826 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_507517.2 Gene:gck-3 / 190400 WormBaseID:WBGene00013355 Length:596 Species:Caenorhabditis elegans


Alignment Length:476 Identity:130/476 - (27%)
Similarity:205/476 - (43%) Gaps:132/476 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 GSSTATETESSSGCGSSAGNSNSSSINDSSQQSTVPLDALEEVFKELKTNLEHRETLK------- 182
            |::..|.|.|::...::...:|:|:|  :|:.||.          :..|...:.:||.       
 Worm     8 GNTNTTTTSSAASAAAAHSAANASTI--TSEYSTT----------QTTTGTFNTDTLSSIGSTST 60

  Fly   183 ---AAPQEPPPVPPKKSPHTIPPKPQIKPKPRVTQKFSRTSDIRRDEDSDNQHKINTDTIIIKPA 244
               :.|.:|||          ||.||:.                                  .|.
 Worm    61 LHGSQPSQPPP----------PPPPQVS----------------------------------SPI 81

  Fly   245 VGAQDAGADDNPDETILRRSKEKRAQKTDAEIYVELRAICNSDDPRER-------YKTTQEVGKG 302
            ..|..|.|                             |:....:|.:|       ||..:.:|.|
 Worm    82 AAAAAASA-----------------------------ALVAQLNPADRWPTEPSAYKLDESIGVG 117

  Fly   303 ASGIVFIAADLQNESQVAVKTIDM-KNQSSKDLILTEIRVLKDFNHKNLVNFLDAYLLEPEDQLW 366
            |:..||.|..|....:||:|.|:: |.|:|.|.:..||:.:...||.|:|::..:::  .:::||
 Worm   118 ATATVFTAYCLPRNEKVAIKCINLEKCQTSVDELSHEIQAMSQCNHPNVVSYYTSFI--AQEELW 180

  Fly   367 VVMEYMDGGPLTDVVTET------------VMKERQIACVCRETLYAISFLHAKGIIHRDIKSDN 419
            |||..::.|.:.|::...            |:.|..||.|.||.|..:.:.|..|.||||||:.|
 Worm   181 VVMRLLNCGSMLDILKRKVKAIGKEQAQFGVLDEVSIATVLREVLKGLEYFHLNGQIHRDIKAGN 245

  Fly   420 VLLGMDGSVKVTDF---GFCANIEGDEKRQ----TMVGTPYWMAPEVVTR-KKYGKKVDIWSIGI 476
            :||..||::::.||   |:.|:..||..||    |.||||.||||||:.: :.|..|.||||:||
 Worm   246 ILLADDGTIQIADFGVSGWLASSGGDLSRQKVRHTFVGTPCWMAPEVMEQVQGYDFKADIWSLGI 310

  Fly   477 MAIEMIEGQPPYLYETPLRALYLIAANGRPDIKS-------WDKLSPNLQDFLDRCLQVEVDRRA 534
            :|||:..|..||....|::.|.|...|..|.:::       :.....:.:..:..|||.:..:|.
 Worm   311 LAIELATGTAPYHKYPPMKVLMLTLQNDPPTLETNAERKDQYKAYGKSFKTLIRDCLQKDPAKRP 375

  Fly   535 TADELLSHPFLNDCSEVKALV 555
            ||.|||.:.|.....:.|.||
 Worm   376 TASELLKYSFFKKGKDKKYLV 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pak3NP_001262638.1 PBD 19..73 CDD:279166
PKc_like 288..545 CDD:304357 100/291 (34%)
S_TKc 293..545 CDD:214567 98/279 (35%)
gck-3NP_507517.2 STKc_OSR1_SPAK 106..386 CDD:270787 98/281 (35%)
S_TKc 108..386 CDD:214567 98/279 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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