DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak3 and mkk-4

DIOPT Version :9

Sequence 1:NP_001262638.1 Gene:Pak3 / 41995 FlyBaseID:FBgn0044826 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_509682.1 Gene:mkk-4 / 185682 WormBaseID:WBGene00003368 Length:363 Species:Caenorhabditis elegans


Alignment Length:368 Identity:95/368 - (25%)
Similarity:156/368 - (42%) Gaps:53/368 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 DEDSDNQHKINTDTIIIKPAVGAQDAGADDNPDETILRRSKEKRAQKTDAE-IYVELRAICNSDD 288
            ||:..|...:...::..:|...:.:......|:|::||.......:..|.| :|....|  |..|
 Worm     6 DENLRNSMSLRPTSLSTRPTSLSVNGNEKTLPEESVLRSLSTGTLKYPDDEHLYTFSSA--NLQD 68

  Fly   289 PRERYKTTQEVGKGASGIVFIAADLQNESQVAVKTIDMKNQSSKDLILTEIRVLKDFN------- 346
                   ...:|.|..|.|:.....:....:|||.|...|...::    :||:|::.:       
 Worm    69 -------LGAIGNGNFGTVYKMRHKETGKLIAVKRIRCNNIGHRE----QIRLLREHDTIVKSEK 122

  Fly   347 HKNLVNFLDAYLLEPEDQLWVVMEYMDGGPLTDVVTETV-------MKERQIACVCRETLYAISF 404
            ..|:|.|..|  :..|...|:.||.||..  .|::.:.|       :.|..:..:...|:.|:.:
 Worm   123 GPNIVKFYGA--IFSEGDCWICMELMDIS--MDLLYKRVYMVKNSRLNENVVGHITVCTVDALDY 183

  Fly   405 LHAK-GIIHRDIKSDNVLLGMDGSVKVTDFGFCANIEGDEKRQTMVGTPYWMAPEVVTRK-KYGK 467
            |..: .|||||:|..|:|:...|:||:.|||.|..:|....:....|...::|||.:|.. ||..
 Worm   184 LKKELKIIHRDVKPSNILVDGTGAVKLCDFGICGQLEESFAKTHDAGCQPYLAPERITSSDKYDV 248

  Fly   468 KVDIWSIGIMAIEMIEGQPPYLYETPLRALYLIAANGRPDIKSWDKLSPNLQD---------FLD 523
            :.|:||:||...|:..|:.||.....|........:|.|.|     |.|:..|         |::
 Worm   249 RSDVWSLGITLYEIATGKFPYQEWNSLFDQIATVVSGDPPI-----LHPDSDDFHYSLPLVKFIN 308

  Fly   524 RCLQVEVDRRATADELLSHPFLNDCSEVKALV-PNIKAAKKVL 565
            .||..:...|...|.|.|..|.    .:.|:. |.|:.||::|
 Worm   309 TCLTKDRRHRPKYDTLKSFDFY----RIYAVAGPEIEEAKRIL 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pak3NP_001262638.1 PBD 19..73 CDD:279166
PKc_like 288..545 CDD:304357 75/281 (27%)
S_TKc 293..545 CDD:214567 74/276 (27%)
mkk-4NP_509682.1 PKc_MKK4 59..347 CDD:270790 84/313 (27%)
S_TKc 72..329 CDD:214567 74/269 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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