DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pak3 and Pak1

DIOPT Version :9

Sequence 1:NP_001262638.1 Gene:Pak3 / 41995 FlyBaseID:FBgn0044826 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001344291.1 Gene:Pak1 / 18479 MGIID:1339975 Length:552 Species:Mus musculus


Alignment Length:563 Identity:230/563 - (40%)
Similarity:322/563 - (57%) Gaps:98/563 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EIGAPTNFQRHFHVSRNQETGDLEGLPAPWVRLM-NSQITRDEQDKNPDAAYHAVKYYNYSIKKK 82
            ||..|::|:...||..:..||:..|:|..|.||: .|.||:.||.|||.|....:::||  .||.
Mouse    74 EISLPSDFEHTIHVGFDAVTGEFTGMPEQWARLLQTSNITKSEQKKNPQAVLDVLEFYN--SKKT 136

  Fly    83 ENEVFKPFITEDVIHEESKEIENYVNYKNKHKSQDPEKSDDDGSSTATETESSSGCGSSAGNSNS 147
            .|.                  :.|:::.:|                            ||.:.||
Mouse   137 SNS------------------QKYMSFTDK----------------------------SAEDYNS 155

  Fly   148 SSINDSSQQSTVPLDALEEVFKELKTNLEHRETLKAAPQEPPPVPPKKSPHTIPPKPQIKPKPRV 212
            |                         |..:.:|:...|..||....:.......|.|.|.|:|..
Mouse   156 S-------------------------NTLNVKTVSETPAVPPVSEDEDDDDDATPPPVIAPRPEH 195

  Fly   213 TQKFSRTSDIRRDEDSDNQHKINTDTIIIK-PAVGAQD-AGADDNPDET------ILRRSKEKRA 269
            |:.|.:          .:|.::.|.::|.. |....:| |.:..:|.|.      .|.|:.||:.
Mouse   196 TKSFGQ----------KDQREVYTRSVIEPLPVTPTRDVATSPISPTENNTTPPDALTRNTEKQK 250

  Fly   270 QK---TDAEIYVELRAICNSDDPRERYKTTQEVGKGASGIVFIAADLQNESQVAVKTIDMKNQSS 331
            :|   :|.||..:||:|.:..||:::|...:::|:||||.|:.|.|:....:||:|.::::.|..
Mouse   251 KKPKMSDEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIKQMNLQQQPK 315

  Fly   332 KDLILTEIRVLKDFNHKNLVNFLDAYLLEPEDQLWVVMEYMDGGPLTDVVTETVMKERQIACVCR 396
            |:||:.||.|:::..:.|:||:||:||:  .|:|||||||:.||.||||||||.|.|.|||.|||
Mouse   316 KELIINEILVMRENKNPNIVNYLDSYLV--GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR 378

  Fly   397 ETLYAISFLHAKGIIHRDIKSDNVLLGMDGSVKVTDFGFCANIEGDE-KRQTMVGTPYWMAPEVV 460
            |.|.|:.|||:..:|||||||||:|||||||||:|||||||.|..:: ||.||||||||||||||
Mouse   379 ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 443

  Fly   461 TRKKYGKKVDIWSIGIMAIEMIEGQPPYLYETPLRALYLIAANGRPDIKSWDKLSPNLQDFLDRC 525
            |||.||.||||||:||||||||||:||||.|.|||||||||.||.|::::.:|||...:|||:||
Mouse   444 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 508

  Fly   526 LQVEVDRRATADELLSHPFLNDCSEVKALVPNIKAAKKVLRRN 568
            |:::|::|.:|.|||.|.||.....:.:|.|.|.|||:..:.|
Mouse   509 LEMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATKNN 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pak3NP_001262638.1 PBD 19..73 CDD:279166 22/54 (41%)
PKc_like 288..545 CDD:304357 156/257 (61%)
S_TKc 293..545 CDD:214567 154/252 (61%)
Pak1NP_001344291.1 PBD 74..128 CDD:334253 22/53 (42%)
STKc_PAK1 256..551 CDD:270820 170/296 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0578
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D757766at2759
OrthoFinder 1 1.000 - - FOG0000763
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100484
Panther 1 1.100 - - O PTHR48015
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.820

Return to query results.
Submit another query.