DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak3 and pak6

DIOPT Version :9

Sequence 1:NP_001262638.1 Gene:Pak3 / 41995 FlyBaseID:FBgn0044826 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_017952376.1 Gene:pak6 / 100495355 XenbaseID:XB-GENE-960331 Length:655 Species:Xenopus tropicalis


Alignment Length:703 Identity:207/703 - (29%)
Similarity:322/703 - (45%) Gaps:196/703 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FTKWFKKKGGDGGSISEIGAPTNFQRHFHVSRNQETGDLEGLPAPWVRLMN-----------SQI 56
            |.|..||:       .||.||.|||...|.|.:.:.|...|||..|..:::           |:|
 Frog     2 FRKKKKKR-------PEISAPLNFQHRVHTSFDAKEGKFVGLPPQWQNVLDTLRRPKPVVDPSRI 59

  Fly    57 TR-------------------------DEQDK-----------NPDAAYHAVKYYNYSIKKKENE 85
            |:                         .:.:|           :|.|...|   .:..:..:|..
 Frog    60 TQVQLKPMKTVVRGSTIGLEGYISGLLHDIEKLSVISSNTLRGSPLARRRA---QSLGVLGEEKP 121

  Fly    86 VFKPF-ITEDVIHEESKEIENYVNYKN-----------------------------KHKSQDP-- 118
            :..|| |.|.:   .|.:..||:|...                             |.||.||  
 Frog   122 LNGPFQIPEQI---PSDKYGNYINCNGESKASRRQTMWPDYRPVEDNYCKPNGSVFKAKSLDPGD 183

  Fly   119 ------------------------EKSDDDGSSTATETE-----SSSGCGSSAGNSNSSSINDSS 154
                                    .||.|:.:.|:.:..     |....|::|.|::|::.:...
 Frog   184 FQGTVDLMALSIPSPSSLQKAHIASKSFDEETPTSRQLSQIVPVSPREEGTAAKNTDSTTKHKLL 248

  Fly   155 QQSTVPLDALEEVFKELKTNLEHRETLKAAPQEPP------------PVPPKKSPHTIP------ 201
            :.:.||....:.|  ||   |...:.:|:...:.|            .:||.   |..|      
 Frog   249 RGAFVPSSRGQSV--EL---LAPAQQIKSEALQGPSSSARGVFAKAASLPPN---HLSPDFTRVI 305

  Fly   202 ---------------PKPQIKPKPRVTQKFSRTSDIRRDEDSDNQHKINTDTIIIKPAVGAQDAG 251
                           |.|...|:.|..|    ||       |.|.| :.|||.      |....|
 Frog   306 SGAPSDSISPLRPCRPSPAGSPRSRPIQ----TS-------STNLH-LCTDTF------GKTQLG 352

  Fly   252 ADDNPDETILRRSKEKRAQKTDAEIYVELRAICNSDDPRERYKTTQEVGKGASGIVFIAADLQNE 316
            ..::|   ::...:.|.|          ||.:.:..|||:..:...::|:|::|:|.||.:..:.
 Frog   353 NQESP---VVTHEQFKTA----------LRMVVDQGDPRQLLEDYVKIGEGSTGVVCIAREKHSG 404

  Fly   317 SQVAVKTIDMKNQSSKDLILTEIRVLKDFNHKNLVNFLDAYLLEPEDQLWVVMEYMDGGPLTDVV 381
            .|||||.:|::.|..::|:..|:.:::|:.|.::|....:||:  .::|||:|||:.||.|||:|
 Frog   405 RQVAVKMMDLRKQQRRELLFNEVVIMRDYQHPSVVEMYKSYLV--GEELWVLMEYVQGGALTDIV 467

  Fly   382 TETVMKERQIACVCRETLYAISFLHAKGIIHRDIKSDNVLLGMDGSVKVTDFGFCANIEGD-EKR 445
            ::|.:.|.|||.||:..|.|:.:||::|:||||||||::||.:||.:|::||||||.|..| .||
 Frog   468 SQTRLNEEQIATVCKSVLQALEYLHSQGVIHRDIKSDSILLTLDGRIKLSDFGFCAQISKDVPKR 532

  Fly   446 QTMVGTPYWMAPEVVTRKKYGKKVDIWSIGIMAIEMIEGQPPYLYETPLRALYLIAANGRPDIKS 510
            :::|||||||||||:.|..||.:|||||:|||.|||::|:|||..::|::|:..:..:..|.:|:
 Frog   533 KSLVGTPYWMAPEVILRCSYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKN 597

  Fly   511 WDKLSPNLQDFLDRCLQVEVDRRATADELLSHPFLNDCSEVKALVPNIKAAKK 563
            ..|.||.|:|||:|.|..:...||||.|||.|.||......:.|||.|:..:|
 Frog   598 SHKASPILRDFLERMLVRDAAERATAQELLDHFFLLQAGLPECLVPLIQQYRK 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pak3NP_001262638.1 PBD 19..73 CDD:279166 21/100 (21%)
PKc_like 288..545 CDD:304357 120/257 (47%)
S_TKc 293..545 CDD:214567 117/252 (46%)
pak6XP_017952376.1 CRIB_PAK_like 10..55 CDD:238526 14/44 (32%)
STKc_PAK6 359..655 CDD:270821 131/304 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D757766at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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