DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak3 and dclk3

DIOPT Version :9

Sequence 1:NP_001262638.1 Gene:Pak3 / 41995 FlyBaseID:FBgn0044826 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_017950468.2 Gene:dclk3 / 100493379 XenbaseID:XB-GENE-983282 Length:793 Species:Xenopus tropicalis


Alignment Length:496 Identity:126/496 - (25%)
Similarity:230/496 - (46%) Gaps:68/496 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 KENEVFKPFITEDVIHEESKEIENYVNYKNKHKSQDPEKSDDDG-------------SSTATETE 133
            |...::.....:|:..|.|..|..:..:.||.:|::.:|...:.             :....:|:
 Frog   299 KYRNIYNRDYEKDISFEGSGTISLHGLHFNKEESKNCKKCPLENIQEEELRLKCKACNCKWKDTK 363

  Fly   134 SSSGCGSSAGNSNSSSINDSS-QQSTVPLDALEEVFKELKTNLEHRETLKAAPQEPPPVPPKKSP 197
            ..:..|....|:|......:. |:|.:|.:.|..  ||||.| :.|:.|..       ...:|..
 Frog   364 RETIIGDDLINNNIEMYEKTDWQESRLPKENLYR--KELKKN-QCRDVLDG-------FSVRKHL 418

  Fly   198 HTIPPKPQIKPKPRVTQKFSRT--SDIRRDEDSDNQHKINTDTIIIKPAVGAQDAGADDNPDETI 260
            :.:......:||    |..||.  .:|..:.|..|:.:...|..|:|     .:||....|.:. 
 Frog   419 NGLLQNDSEEPK----QSMSRLHGDNITINNDYGNKKEKTKDPQILK-----TEAGPGGFPPKL- 473

  Fly   261 LRRSKEKRAQKTDAE---IYVELRAIC--NSDDPRERYKTTQEVGKGASGIVFIAADLQNESQVA 320
                      ::||:   ::...|..|  .|.|....|:..:.:|.|...:|.:........:.|
 Frog   474 ----------RSDAKGNCLFTLKRPCCIKTSRDIESYYEIGRTIGDGNFAVVKVCRPWNENQEYA 528

  Fly   321 VKTID-MKNQSSKDLILTEIRVLKDFNHKNLVNFLDAYLLEPEDQLWVVMEYMDGGPLTDVVTET 384
            :|.|| .|.:..:|:|..|:|::|..:|.|:|.....|  |.|.::::::||:.||.|.||:||:
 Frog   529 MKIIDKSKLRGKEDIIENEVRIIKHLSHPNIVKLFSDY--ETEKEIYLILEYIRGGDLFDVITES 591

  Fly   385 V-MKERQIACVCRETLYAISFLHAKGIIHRDIKSDNVLL--GMDG--SVKVTDFGFCANIEGDEK 444
            : ..|...|.:..:...|:.::|:|.|:|||:|.:|:|:  ..||  |:|:.|||......|  .
 Frog   592 IKFTEHDAALMLIDLCEALKYIHSKHIVHRDLKPENLLVQHNPDGSKSLKLADFGLAIYATG--P 654

  Fly   445 RQTMVGTPYWMAPEVVTRKKYGKKVDIWSIGIMAIEMIEGQPPYLYETPLR---ALYLIAANGRP 506
            ..|:.|||.::|||:::.|.||.|||:|:.|::...::.|.||  :.:|.|   .|:.|..:|..
 Frog   655 IFTVCGTPTYVAPEILSEKGYGLKVDMWATGVILYILLCGFPP--FRSPDRNQEELFQIIQSGEY 717

  Fly   507 DI--KSWDKLSPNLQDFLDRCLQVEVDRRATADELLSHPFL 545
            :.  ..||.:|..::|.:.:.|.:..:.|.:|..:|.|.::
 Frog   718 EFLPPYWDHISEEVKDLISKLLVLNPEIRYSAKCVLQHSWV 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pak3NP_001262638.1 PBD 19..73 CDD:279166
PKc_like 288..545 CDD:304357 82/267 (31%)
S_TKc 293..545 CDD:214567 81/262 (31%)
dclk3XP_017950468.2 DCX_DCLK3 87..171 CDD:340528
STKc_DCKL3 500..757 CDD:271087 81/262 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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