DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak3 and lats1

DIOPT Version :9

Sequence 1:NP_001262638.1 Gene:Pak3 / 41995 FlyBaseID:FBgn0044826 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_017949762.1 Gene:lats1 / 100145677 XenbaseID:XB-GENE-959763 Length:1117 Species:Xenopus tropicalis


Alignment Length:690 Identity:149/690 - (21%)
Similarity:249/690 - (36%) Gaps:213/690 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TKWFKKKGGDGGSISEIGAPTNFQRHFHVS-----RNQETGDLE-------GLPAPWVRLMNSQI 56
            |...:.:.|.||.:|     :|...:.:|.     .|:.:.:||       |.|..|.:..::|.
 Frog   375 TTTLQVQSGSGGPLS-----SNAYNNSNVPPSMLVSNRNSHNLEMYNISLPGHPTSWPQASSTQS 434

  Fly    57 ----------------TRDEQDKNPDAAYHAVKYYNYS------------IKK--KENEVFKPFI 91
                            .|.....||.|::.|:.....:            |::  |...|.||.:
 Frog   435 APGSNHDMLSWQTNIPVRSNSFNNPVASWQALSTNTQTSATTVTAVTPSPIQQPVKSIRVLKPEL 499

  Fly    92 ---------------------TEDVIHEESKEIENYVNYKN------KHKSQ------DP----E 119
                                 .|.|.|..|.::....||:.      ||..|      :|    .
 Frog   500 QTALAPTHPTWMTPNVQPGPFQEGVSHNTSAQLAEAPNYQGPPPPYPKHLLQQNTTVYEPGLKSS 564

  Fly   120 KSDDDGSSTATETESSSGCGSSAGNSNSSSINDSSQQSTVPLDALEEVFKELKTNLEHRETLKAA 184
            |.|..|.||.|:.|.......:.|      |.:..|.:|.|:..     :..|.:.|.||:    
 Frog   565 KEDAAGVSTCTQEEMEKNTEPTTG------ITEKKQITTSPVPV-----RRNKRDEERRES---- 614

  Fly   185 PQEPPPVPPKKSPHTIPPKPQIKPKPRVTQKFSRTSDIRRDEDSDNQ---HKINTDTIIIKPAVG 246
                                ||:.......||.....:.....|.:|   .|...:..:::..:.
 Frog   615 --------------------QIQSYSPQAFKFFMEQHVENILKSHHQRLHRKKQLENEMMRVGLS 659

  Fly   247 AQDAGADDNPDETILRRSKE----KRAQKTDAEIYVELRAICNSDDPRERYKTTQEVGKGASGIV 307
            .:   |.|...:.:.::...    ||| |.:..::|:::.:                |.||.|.|
 Frog   660 QE---AQDQMRKMLCQKESNYIRLKRA-KMEKSMFVKIKTL----------------GIGAFGEV 704

  Fly   308 FIAADLQNESQVAVKTIDMKNQSSKDLIL--------TEIRVLKDFNHKNLVNFLDAYLLEPEDQ 364
            .:|......:..|:||:     ..||::|        .|..:|.:.:::.:|...  |..:.:|.
 Frog   705 CLARKTDTNALYAMKTL-----RKKDVLLRNQVAHVKAERDILAEADNEWVVRLY--YSFQDKDN 762

  Fly   365 LWVVMEYMDGGPLTDVVTET-VMKERQIACVCRETLYAISFLHAKGIIHRDIKSDNVLLGMDGSV 428
            |:.||:|:.||.:..::... |..|........|...|:..:|....||||||.||:|:..||.:
 Frog   763 LYFVMDYIPGGDMMSLLIRMGVFPEDLARFYIAELTCAVESVHKMDFIHRDIKPDNILIDRDGHI 827

  Fly   429 KVTDFGFCANI----------EGDEKRQ------------------------------------- 446
            |:||||.|...          .||..||                                     
 Frog   828 KLTDFGLCTGFRWTHDSKYYQSGDHLRQDSMDFSNEWGDPANCRCGDRLKPLEWRAARQHQRCLA 892

  Fly   447 -TMVGTPYWMAPEVVTRKKYGKKVDIWSIGIMAIEMIEGQPPYLYETPLRA-LYLIAANGRPDIK 509
             ::||||.::||||:.|..|.:..|.||:|::..||:.||||:|.::|:.. :.:|.......|.
 Frog   893 HSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQSPVETQMKVIKWQTTLHIP 957

  Fly   510 SWDKLSPNLQDFLDRCLQVEVDR--RATADELLSHPFLND 547
            :..||||...|.:.:..:...||  :...||:..|||..:
 Frog   958 AQAKLSPEASDLIVKLCRGPEDRLGKNGVDEIKVHPFFKN 997

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pak3NP_001262638.1 PBD 19..73 CDD:279166 14/81 (17%)
PKc_like 288..545 CDD:304357 84/316 (27%)
S_TKc 293..545 CDD:214567 84/311 (27%)
lats1XP_017949762.1 UBA_LATS1 102..142 CDD:270580
STKc_LATS1 688..1069 CDD:270775 86/333 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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