DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pak3 and pak1

DIOPT Version :9

Sequence 1:NP_001262638.1 Gene:Pak3 / 41995 FlyBaseID:FBgn0044826 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_017947249.1 Gene:pak1 / 100135731 XenbaseID:XB-GENE-967716 Length:521 Species:Xenopus tropicalis


Alignment Length:558 Identity:217/558 - (38%)
Similarity:311/558 - (55%) Gaps:115/558 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 IGAPTNFQRHFHVSRNQETGDLEGLPAPWVRLM-NSQITRDEQDKNPDAAYHAVKYYNYSIKKKE 83
            |.:|..::..:||..:..||:..|:|..|.:|: .:.|::.:|.|||......:.:|:       
 Frog    65 ISSPFGYEHIYHVGIDPSTGEFTGMPKQWAQLLQTANISKIDQKKNPQVVLDVLNFYS------- 122

  Fly    84 NEVFKPFITEDVIHEESKEIENYVNYKNKHKSQDPEKSDDDGSSTATETESSSGCGSSAGNSNSS 148
                         .|.:.:.:.|:::                      |::|    ..|.|||| 
 Frog   123 -------------SETTSKSQKYMSF----------------------TDNS----REAYNSNS- 147

  Fly   149 SINDSSQQSTVPLDALEEVFKELKTNLEHRETLKAAPQEPPPVPPKKSPHT---------IPPKP 204
                       .|||        |...|..|.|.....|.||..|.:..||         .||.|
 Frog   148 -----------VLDA--------KPVPEVAEVLPVPEAEDPPAFPPRPDHTKSIYTRSVIEPPVP 193

  Fly   205 QIKPKPRVTQKFSRTSDIRRDEDSDNQHKINTDTIIIKPAVGAQDAGADDNPDETILRRSKEKRA 269
            .:..|| .|:..|..:|                             ||:.:.|:|      :|:.
 Frog   194 PLAAKP-TTENGSSVTD-----------------------------GAESSVDKT------KKKP 222

  Fly   270 QKTDAEIYVELRAICNSDDPRERYKTTQEVGKGASGIVFIAADLQNESQVAVKTIDMKNQSSKDL 334
            :.||.||..:||:|.:..||:::|...:::|:||||.|:||.|:....:||:|.::::.|..|:|
 Frog   223 KMTDEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYIAVDVATGQEVAIKQMNLQQQPKKEL 287

  Fly   335 ILTEIRVLKDFNHKNLVNFLDAYLLEPEDQLWVVMEYMDGGPLTDVVTETVMKERQIACVCRETL 399
            |:.||.|:::..|.|:||:||:||:  .::|||||||:.||.||||||||.|:|.:||.||||.|
 Frog   288 IINEILVMRENKHPNIVNYLDSYLV--GEELWVVMEYLAGGSLTDVVTETCMQEGEIAAVCRECL 350

  Fly   400 YAISFLHAKGIIHRDIKSDNVLLGMDGSVKVTDFGFCANIEGDE-KRQTMVGTPYWMAPEVVTRK 463
            .|:.|||:..:|||||||||:||||||:||:|||||||.|..:: ||.|||||||||||||||||
 Frog   351 QALEFLHSNQVIHRDIKSDNILLGMDGAVKLTDFGFCAQISPEQNKRSTMVGTPYWMAPEVVTRK 415

  Fly   464 KYGKKVDIWSIGIMAIEMIEGQPPYLYETPLRALYLIAANGRPDIKSWDKLSPNLQDFLDRCLQV 528
            .||.|||:||:|||||||:||:||||.|.|||||||||.||.|.::..:|.||..:|||.|||::
 Frog   416 AYGPKVDVWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPQLQEPEKKSPAFRDFLSRCLEM 480

  Fly   529 EVDRRATADELLSHPFLNDCSEVKALVPNIKAAKKVLR 566
            :|::|.:|.:||.||||.....:.:|.|.|...|::.:
 Frog   481 DVEKRGSARDLLQHPFLKVAKPMSSLTPYIITGKQMAK 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pak3NP_001262638.1 PBD 19..73 CDD:279166 15/53 (28%)
PKc_like 288..545 CDD:304357 153/257 (60%)
S_TKc 293..545 CDD:214567 151/252 (60%)
pak1XP_017947249.1 CRIB_PAK_like 63..108 CDD:238526 11/42 (26%)
STKc_PAK_I 238..498 CDD:270814 154/261 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D425477at33208
OrthoFinder 1 1.000 - - FOG0000763
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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