DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ttc1 and SGT2

DIOPT Version :10

Sequence 1:NP_650543.1 Gene:Ttc1 / 41993 FlyBaseID:FBgn0038428 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_014649.1 Gene:SGT2 / 854168 SGDID:S000005533 Length:346 Species:Saccharomyces cerevisiae


Alignment Length:283 Identity:74/283 - (26%)
Similarity:114/283 - (40%) Gaps:56/283 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EEITEKEATSTRQSEKDVDEIVEKQNQLALDDEAEQGAAG-----GDSIATPTTVDSELTIEELR 76
            :||:|..|.|...:...:.|      ....:.||..|..|     |..:|......|.:.....:
Yeast    23 KEISEDGADSLNVAMDCISE------AFGFEREAVSGILGKSEFKGQHLADILNSASRVPESNKK 81

  Fly    77 EREKDLS---PEQLTANKEKADKLKVEGNELFKNDDAEGAAKTYTEALDICPSASSKERAVLYGN 138
            :..:::.   ||.....|.||:.||::||:...|.|.|.|...||||:.:.|:     .|:.|.|
Yeast    82 DDAENVEINIPEDDAETKAKAEDLKMQGNKAMANKDYELAINKYTEAIKVLPT-----NAIYYAN 141

  Fly   139 RAAAKIKLEANKAAIDDCTKAIELWPEYVRVLLRRAKLYEQEDKPDEALEDYKKVTEID------ 197
            ||||...|:....|:.|...||.:.|.|.|...|.......:.||:||||.||||.:|:      
Yeast   142 RAAAHSSLKEYDQAVKDAESAISIDPSYFRGYSRLGFAKYAQGKPEEALEAYKKVLDIEGDNATE 206

  Fly   198 ------PGQQEAREAQIRLPPIINERN-----EKLKNEMMSSLKDLGNMILKPFG---------- 241
                  ...::..|..:.|...:.|::     :..:......|.|||:::....|          
Yeast   207 AMKRDYESAKKKVEQSLNLEKTVPEQSRDADVDASQGASAGGLPDLGSLLGGGLGGLMNNPQLMQ 271

  Fly   242 -----LST----QNFQ-MQQDPN 254
                 :|.    ||.| |.|||:
Yeast   272 AAQKMMSNPGAMQNIQKMMQDPS 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ttc1NP_650543.1 3a0801s09 16..>232 CDD:273380 62/239 (26%)
TPR repeat 94..122 CDD:276809 13/27 (48%)
TPR repeat 132..162 CDD:276809 12/29 (41%)
TPR repeat 167..195 CDD:276809 12/27 (44%)
SGT2NP_014649.1 SGTA_dimer 7..71 CDD:465168 12/53 (23%)
NlpI 41..221 CDD:443815 53/190 (28%)
TPR repeat 102..130 CDD:276809 13/27 (48%)
TPR repeat 135..165 CDD:276809 12/29 (41%)
TPR repeat 170..198 CDD:276809 12/27 (44%)
STI1 264..298 CDD:128966 8/31 (26%)

Return to query results.
Submit another query.