DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14894 and STUB1

DIOPT Version :9

Sequence 1:NP_001262636.1 Gene:CG14894 / 41993 FlyBaseID:FBgn0038428 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_477441.1 Gene:STUB1 / 34433 FlyBaseID:FBgn0027052 Length:289 Species:Drosophila melanogaster


Alignment Length:221 Identity:42/221 - (19%)
Similarity:82/221 - (37%) Gaps:70/221 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 KLKVEGNELFKNDDAEGAAKTYTEALDICPSASSKE--RAVLYGNRAAAKIKLEANKAAIDDCTK 158
            :||.:||.||       ||:.|.:|::....|..|.  .|..:.|||...:||:..:....|..:
  Fly    16 QLKEQGNCLF-------AARKYDDAINCYSKAIIKNPTNATYFTNRALCNLKLKRWELCCQDSRR 73

  Fly   159 AIEL--------------------WPEYVRVLLRRAKLYEQE----------------DKPDEAL 187
            |:::                    :.|.::.|.|...|.:::                .|....:
  Fly    74 ALDIDGNLLKGHFFLGQGLMEIDNFDEAIKHLQRAYDLSKEQKQNFGDDITLQLRLARKKRWNVM 138

  Fly   188 EDYKKVTEID---------PGQQEAREAQIRL-----PPIINERNEKLKNEMMSSLKDLGNMILK 238
            |:.:...||:         .|..|:|.|.::|     ...:.::.::::.|....:|:|.|:..|
  Fly   139 EEKRIQQEIELQSYLNGLIKGDMESRLANLKLNGNVHDEQLKDKQQEIEQECDDHIKELNNIFSK 203

  Fly   239 -----------PFGLSTQNFQMQQDP 253
                       .|.....:|::..||
  Fly   204 VDERRKKREVPDFLCGKISFEILTDP 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14894NP_001262636.1 TPR_11 93..164 CDD:290150 20/89 (22%)
TPR repeat 94..122 CDD:276809 10/25 (40%)
TPR_11 132..198 CDD:290150 16/110 (15%)
TPR repeat 132..162 CDD:276809 8/29 (28%)
TPR_1 133..166 CDD:278916 8/52 (15%)
TPR 167..198 CDD:197478 7/55 (13%)
TPR repeat 167..195 CDD:276809 5/43 (12%)
STUB1NP_477441.1 TPR_11 17..78 CDD:290150 20/67 (30%)
TPR 17..47 CDD:197478 12/36 (33%)
TPR repeat 17..42 CDD:276809 11/31 (35%)
TPR repeat 47..77 CDD:276809 8/29 (28%)
TPR repeat 82..110 CDD:276809 3/27 (11%)
U-box 213..285 CDD:252675 4/17 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462446
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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