DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ema and Clec16a

DIOPT Version :9

Sequence 1:NP_650542.1 Gene:ema / 41992 FlyBaseID:FBgn0038427 Length:1067 Species:Drosophila melanogaster
Sequence 2:XP_006522723.1 Gene:Clec16a / 74374 MGIID:1921624 Length:1052 Species:Mus musculus


Alignment Length:1133 Identity:506/1133 - (44%)
Similarity:678/1133 - (59%) Gaps:190/1133 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MF-RSRSWFGGPWGGRPKNRLSLEHLKYLYSILEKNTTVSESNRGLLVESLRCIAEILIWGDQHD 64
            || |||||.||......:|..||:||||||.:|.|||||:|.||.||||::|.|.||||||||:|
Mouse     1 MFGRSRSWVGGGHSKSSRNIHSLDHLKYLYHVLTKNTTVTEQNRNLLVETIRSITEILIWGDQND 65

  Fly    65 SLVFDFFLEKNMLSYFLHIMRQKSGGSSFVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIMV 129
            |.||||||||||..:||:|:|||||  .:||||||||||||||||.:|||||||||||:||||:|
Mouse    66 SSVFDFFLEKNMFVFFLNILRQKSG--RYVCVQLLQTLNILFENISHETSLYYLLSNNYVNSIIV 128

  Fly   130 HKFDFSDEDVMGYYILFLKTLSLKLNTHTIHFFYNEHTNDFPLYTEAIKFFNHPESMVRIAVRTI 194
            ||||||||::|.|||.||||||||||.||:|||||||||||.|||||||||||||||||||||||
Mouse   129 HKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNEHTNDFALYTEAIKFFNHPESMVRIAVRTI 193

  Fly   195 SLNVYKV--QNPSMLRFIRDKTAAPYFSNLVWFIGKHILELDTCVRTDIDHQSNQKLSNLVAEHL 257
            :||||||  .|.:||.:||||||.|||||||||||.|::|||.||:||.:|::..|||:||||||
Mouse   194 TLNVYKVSLDNQAMLHYIRDKTAVPYFSNLVWFIGSHVIELDNCVQTDEEHRNRGKLSDLVAEHL 258

  Fly   258 DHLHYLSDILLLEIKDLNAVLTEHLLHKLFVPLYIFSLTPAPPPPSLAVVTQNLAAVLNRNVDID 322
            ||||||:|||::..:.||.|||:|||::||:|||::||                     .|.|  
Mouse   259 DHLHYLNDILIINCEFLNDVLTDHLLNRLFLPLYVYSL---------------------ENPD-- 300

  Fly   323 IQEMHNPRVSSIVALFLLSLVFLVVSHAPLVHALAWVILNGDHS-VFKEGAAEILNSYVEHREVV 386
             :....|::|..|:|:|||.|||::.|||||::||.||||||.| .:.:.|.::..|..:..   
Mouse   301 -KGGERPKISLPVSLYLLSQVFLIIHHAPLVNSLAEVILNGDLSETYTKPAQDVPRSSAKPS--- 361

  Fly   387 VPGFGEPDESLEQALD----------------TVTGQSSSSSYALSEDSGVESSSPATTELDSQA 435
            :..|.:|.|:||::|:                ...|:........:||:..::.....||..|::
Mouse   362 IRCFIKPTETLERSLEMNKHKGKKRMQKRPNYKNVGEEEDEERGSAEDAQEDAEKTKGTEGGSKS 426

  Fly   436 --DAVEAEQIKL--------------------RNITDEEKQLLQKSSSSTKADFAEMAKPFLDTV 478
              .:.|.|:|::                    :|.|||||      |::|.::.|:.::||||.|
Mouse   427 MKTSGEREEIEMVIMKLGKLSEVAAAGTSVQEQNTTDEEK------SAATNSENAQWSRPFLDMV 485

  Fly   479 LHALDCTENDYLALLSLCLIYAMSHNRGIKNEWFE--QVLAKSTRGAFSYKTALIEHLLNIITQS 541
            .||||..::||.||..|||:||||||:|:..|..:  |:...|.....:|...|.|.|:.|:..:
Mouse   486 YHALDSPDDDYHALFVLCLLYAMSHNKGMDPEKLKRIQLPVPSEAEKTTYNHLLAERLIRIMNNA 550

  Fly   542 SQPSSRIRLITVEIALELLVTFTRPSSDDSRCITAAQQDL----LFSARNQSMVVIRNFYKSEDI 602
            :||..||||.|:|::..||......||.   |:.   :|:    |..||.:|:.::|:|||.|:|
Mouse   551 AQPDGRIRLATLELSCLLLKQQVLTSSG---CVI---KDVHLACLEGAREESVHLVRHFYKGEEI 609

  Fly   603 FLDLFEDEYNEMRKAQLNVEFLCMDSTILLPPTGTPLTGINFTRRLPCGEVEKARRAIRVYFLLR 667
            |||:|||||..|....:|||:|.||::|||||||||||||:|.:|||||:|||.||||||:|:||
Mouse   610 FLDMFEDEYRSMTIKPMNVEYLMMDASILLPPTGTPLTGIDFVKRLPCGDVEKTRRAIRVFFMLR 674

  Fly   668 RTCQKFLNEKESLLPLTNVVNLVQVENVLDLNNSDLIACTVVAKDSSKQRRFLVIDALQLILVEP 732
            ....:...|.|:.||||...:|::.::||||||||||||||:.||....:|||.:|..|:.||||
Mouse   675 SLSLQLRGEPETQLPLTREEDLIKTDDVLDLNNSDLIACTVITKDGGMVQRFLAVDIYQMSLVEP 739

  Fly   733 DAKLLGWGVAKFVGFLQDVEVQGDKDDSRCLHITVHR-GGVTHNRT-PLLSAKFLFDDHIRCMAA 795
            |...|||||.||.|.|||::|.|.:||||.|:||:|: ....|::. |:|.|.|:|.|||||:.|
Mouse   740 DVSRLGWGVVKFAGLLQDMQVTGVEDDSRALNITIHKPASSPHSKPFPILQATFVFSDHIRCIIA 804

  Fly   796 KQRLTKGRSKARQKKMYQIAQLIEIPGQMDSPVYAVGGTMVASSSGGS-------------GNSS 847
            ||||.|||.:||:.||.:||.|:::|.|   |...|.|..:.|||..|             |:|.
Mouse   805 KQRLAKGRIQARRMKMQRIAALLDLPIQ---PTTEVLGFGLCSSSSSSQHLPFRFYEQCRRGSSD 866

  Fly   848 GSSSRSSHHRPMFSTANRVPGFAAVLRGSNSAGVSRTQMAPNRSIEGIRNESAGRSRRRSPSSTS 912
            .:..||     :|::.::|||||..                    :.|...|:......||...|
Mouse   867 PTVQRS-----VFASVDKVPGFAVA--------------------QCINQHSSPSLSSPSPPFAS 906

  Fly   913 GS---NLRADHSDRERSPSVSMGSHSSSQSRENSQPRSTGNRSRESSPRMPRPRSEEIPL----- 969
            ||   :....|.|       |.||.|:..:.::.....|       :|..|:|..::..:     
Mouse   907 GSPGGSGSTSHCD-------SGGSSSAPSATQSPADAPT-------TPEQPQPHLDQSVIGNEMD 957

  Fly   970 EDFQHSRNNSPHSRG------NPSPASRSHTPIRVLHYD--------------QLSGHSGSPREA 1014
            .:.:.|:|:|..|..      :||........|.:|:.|              .:..||      
Mouse   958 VNSKPSKNSSARSSEGETMHLSPSLLPAQQPTISLLYEDTADTLSVESLTIVPPVDPHS------ 1016

  Fly  1015 SLGGTNALLSQLNGLNREVLPTQSSEET 1042
                    |..|:|:::  |||..:.:|
Mouse  1017 --------LRALSGISQ--LPTLPAADT 1034

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emaNP_650542.1 FPL 50..199 CDD:313053 122/148 (82%)
Clec16aXP_006522723.1 FPL 51..198 CDD:370666 122/148 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831203
Domainoid 1 1.000 533 1.000 Domainoid score I282
eggNOG 1 0.900 - - E1_KOG2219
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H71019
Inparanoid 1 1.050 835 1.000 Inparanoid score I451
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52345
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006421
OrthoInspector 1 1.000 - - oto95429
orthoMCL 1 0.900 - - OOG6_103636
Panther 1 1.100 - - LDO PTHR21481
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5071
SonicParanoid 1 1.000 - - X4687
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.790

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