DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ema and clec16a

DIOPT Version :9

Sequence 1:NP_650542.1 Gene:ema / 41992 FlyBaseID:FBgn0038427 Length:1067 Species:Drosophila melanogaster
Sequence 2:XP_003198156.1 Gene:clec16a / 393184 ZFINID:ZDB-GENE-040426-951 Length:1046 Species:Danio rerio


Alignment Length:1077 Identity:497/1077 - (46%)
Similarity:653/1077 - (60%) Gaps:156/1077 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MF-RSRSWFGGPWGGRPKNRLSLEHLKYLYSILEKNTTVSESNRGLLVESLRCIAEILIWGDQHD 64
            || |||||.||.  |:.||..||:||||:|.:|.|||||::.||.||||::|.|.||||||||:|
Zfish     1 MFGRSRSWVGGQ--GKSKNIHSLDHLKYMYHVLTKNTTVTDHNRNLLVETIRSITEILIWGDQND 63

  Fly    65 SLVFDFFLEKNMLSYFLHIMRQKSGGSSFVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIMV 129
            |.||||||||||.::||:|:|||||  .:||||||||||||||||.:||||||||||||||||:|
Zfish    64 SSVFDFFLEKNMFAFFLNILRQKSG--RYVCVQLLQTLNILFENISHETSLYYLLSNNHVNSIIV 126

  Fly   130 HKFDFSDEDVMGYYILFLKTLSLKLNTHTIHFFYNEHTNDFPLYTEAIKFFNHPESMVRIAVRTI 194
            ||||||||::|.|||.||||||||||.||:|||||||||||.|||||||||||||||||||||||
Zfish   127 HKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNEHTNDFALYTEAIKFFNHPESMVRIAVRTI 191

  Fly   195 SLNVYKV--QNPSMLRFIRDKTAAPYFSNLVWFIGKHILELDTCVRTDIDHQSNQKLSNLVAEHL 257
            :||||||  .|..||.:||||||.|||||||||||.|::|||.||:||.:|::..|||:||||||
Zfish   192 TLNVYKVSLDNQHMLHYIRDKTAVPYFSNLVWFIGSHVIELDKCVQTDEEHKNRGKLSDLVAEHL 256

  Fly   258 DHLHYLSDILLLEIKDLNAVLTEHLLHKLFVPLYIFSLTPAPPPPSLAVVTQNLAAVLNRNVDID 322
            ||||||:|||.:..:.||.|||:|||::||:|||::||           |||             
Zfish   257 DHLHYLNDILTINCEFLNDVLTDHLLNRLFLPLYVYSL-----------VTQ------------- 297

  Fly   323 IQEMHNPRVSSIVALFLLSLVFLVVSHAPLVHALAWVILNGDHSVF---KEGAAEILNSYVEHRE 384
             ::..:.:::..|:|:|||.|||::.:.||||:||.||||||.|||   .|.:|...:|....|.
Zfish   298 -EQTEDRKINPQVSLYLLSQVFLIIHYQPLVHSLADVILNGDLSVFTLQTEQSAHKSSSNAGVRR 361

  Fly   385 VVVPGFGEPDESLEQALDTV----------------TGQSSSSSYALSEDSGVESSSPATTELDS 433
                 |.:|.||||::|:..                .|:.........|....|......||..|
Zfish   362 -----FTKPLESLERSLEMSRQRGRKRAQKRPNYKNVGEEEEEKRGSDEGPEEEKEKAKGTEASS 421

  Fly   434 QA-----DAVEAEQIKL-------------RNITDEEKQLLQKSSSSTKADFAEMAKPFLDTVLH 480
            :|     |..|.|.:.:             :||||||     ||:::......:.::||||.:..
Zfish   422 KASRTSGDKEEIEMVVMEKCRISDVSTLTEQNITDEE-----KSAAAAARSEGQKSRPFLDMLYS 481

  Fly   481 ALDCTENDYLALLSLCLIYAMSHNRGIKNEWFEQV-LAKSTRGAFSYKTALIEHLLNIITQSSQP 544
            ||||...||.||..|||:|||||::||..|..|:: |...::...:|...|:|.::.|::|::||
Zfish   482 ALDCDTEDYQALFVLCLLYAMSHSKGINPELLERIQLPVPSQERNTYSQVLVERVIRIMSQAAQP 546

  Fly   545 SSRIRLITVEIALELLVTFTRPSSDDSRCITAAQQDL----LFSARNQSMVVIRNFYKSEDIFLD 605
            ..::||.|:|::..||   .:.....|:||.   :|:    |..||.:|:.::|.|||.|:||||
Zfish   547 DGKVRLATLELSCLLL---KQSVLSGSQCII---KDIHLACLEGAREESLHLLRQFYKGEEIFLD 605

  Fly   606 LFEDEYNEMRKAQLNVEFLCMDSTILLPPTGTPLTGINFTRRLPCGEVEKARRAIRVYFLLRRTC 670
            :|||||..|....||||:|.||::|||||||||||||:|.:|||||:||:.||||||:|:||...
Zfish   606 MFEDEYRSMMSKPLNVEYLMMDASILLPPTGTPLTGIDFVKRLPCGDVERTRRAIRVFFMLRSLS 670

  Fly   671 QKFLNEKESLLPLTNVVNLVQVENVLDLNNSDLIACTVVAKDSSKQRRFLVIDALQLILVEPDAK 735
            .:...|.|:.||||...:|::.::||||||||||||.||:||..:.:|||.:|..|:.|||||:|
Zfish   671 LQLQGEPETQLPLTRPEDLIKTDDVLDLNNSDLIACMVVSKDGVQAQRFLAVDVYQMSLVEPDSK 735

  Fly   736 LLGWGVAKFVGFLQDVEVQGDKDDSRCLHITVHRGGVTHN----RTPLLSAKFLFDDHIRCMAAK 796
            .|||||.||.|.|||::|.|.:||||.|:|.:|:  .|.|    ..|:|.|.|:|.|||||:.||
Zfish   736 RLGWGVVKFAGLLQDMQVSGVEDDSRALNIIIHK--PTSNPHAKPMPILQANFIFADHIRCIIAK 798

  Fly   797 QRLTKGRSKARQKKMYQIAQLIEIPGQMDSPVYAVGGTMVASSSGGSGNSSGSSS------RSSH 855
            |||.|||.:||:.||.:||.|:::|.|..:.|.            |....|.:||      ..|.
Zfish   799 QRLAKGRIQARRMKMQRIAALLDLPVQPSTEVL------------GFSQPSVTSSLPFRFYDQSR 851

  Fly   856 HRPMFSTANRVPGFAAV-----LRGSNSAGVSRTQMAPNRSIEGIRNESAGRSRRR----SPSST 911
            ..|.|::.::|||||..     ...|:|:.||.:...|..|.:.:...:.....:.    :||.|
Zfish   852 RGPAFASVDKVPGFAVAHIAQHNSTSSSSSVSPSSSGPPDSCDSLTASNTSTQSQTGLALAPSLT 916

  Fly   912 SGS----NLRADHS-----------------DRERSPSVSMGSHSSSQSRENSQPRS--TGNRSR 953
            ...    :|.:|:.                 .|.||.|.........:....|:|..  ||.|..
Zfish   917 PAPQPTISLLSDNDAETLSVESLTLLPPADPPRLRSFSTQSSIQDEDEVANTSRPEDDCTGVRDA 981

  Fly   954 ESS-----PRMPRPRSEEIPL-----EDFQHSRNNSP 980
            :|.     |.......|..||     ||...::...|
Zfish   982 QSQDISIIPEEDESSPESGPLLAGETEDLMQAQREEP 1018

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emaNP_650542.1 FPL 50..199 CDD:313053 123/148 (83%)
clec16aXP_003198156.1 FPL 49..196 CDD:286801 123/148 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574166
Domainoid 1 1.000 530 1.000 Domainoid score I272
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H71019
Inparanoid 1 1.050 683 1.000 Inparanoid score I678
OMA 1 1.010 - - QHG52345
OrthoDB 1 1.010 - - D1319544at2759
OrthoFinder 1 1.000 - - FOG0006421
OrthoInspector 1 1.000 - - oto40663
orthoMCL 1 0.900 - - OOG6_103636
Panther 1 1.100 - - LDO PTHR21481
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4687
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.910

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