DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ema and gop-1

DIOPT Version :9

Sequence 1:NP_650542.1 Gene:ema / 41992 FlyBaseID:FBgn0038427 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_498117.3 Gene:gop-1 / 175721 WormBaseID:WBGene00001660 Length:892 Species:Caenorhabditis elegans


Alignment Length:1006 Identity:344/1006 - (34%)
Similarity:499/1006 - (49%) Gaps:213/1006 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFRSRSWFGGPWGGRPKNRLSLEHLKYLYSILEKNTTVSESNRGLLVESLRCIAEILIWGDQHDS 65
            |||.....|..|  :|||..|||:||||..:|.||..|:|:|:.:|||:||.||||||||||:|:
 Worm     1 MFRKLGSSGSLW--KPKNPHSLEYLKYLQGVLTKNEKVTENNKKILVEALRAIAEILIWGDQNDA 63

  Fly    66 LVFDFFLEKNMLSYFLHIMRQKSGGSSFVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIMVH 130
            .|||||||:.||.|||.||.|   |::.:.|||||||||||||||:|||||:||||||||||:.|
 Worm    64 SVFDFFLERQMLLYFLKIMEQ---GNTPLNVQLLQTLNILFENIRHETSLYFLLSNNHVNSIISH 125

  Fly   131 KFDFSDEDVMGYYILFLKTLSLKLNTHTIHFFYNEHTNDFPLYTEAIKFFNHPESMVRIAVRTIS 195
            |||..::::|.|||.||||||.|||..|||||:||.|.:|||..|.:|.:|..|||||||||.|.
 Worm   126 KFDLQNDEIMAYYISFLKTLSFKLNPATIHFFFNETTEEFPLLVEVLKLYNWNESMVRIAVRNIL 190

  Fly   196 LNVYKVQNPSMLRFIRDKTAAPYFSNLVWFIGKHILELDTCVRTDIDHQSN-QKLSNLVAEHLDH 259
            ||:.:||:.||:.| ..|....|.|.|:..:....||:||.||:..:..:| ::|...|.:.:|.
 Worm   191 LNIVRVQDDSMIIF-AIKHTKEYLSELIDSLVGLSLEMDTFVRSAENVLANRERLRGKVDDLIDL 254

  Fly   260 LHYLSDILLLE--IKDLNAVLTEHLLHKLFVPLYIFSLTPAPPPPSLAVVTQNLAAVLNRNVDID 322
            :||:.::|.:|  .:.|:.::|...|.    ||.:.|::|.                        
 Worm   255 IHYIGELLDVEAVAESLSILVTTRYLS----PLLLSSISPR------------------------ 291

  Fly   323 IQEMHNPRVSSIVALFLLSLVFLVVSHAPLVHALA--------------WV-------------- 359
             ::.|:..::.|.|||..|...|:|.|...::...              |:              
 Worm   292 -RDNHSLLLTPISALFFFSEFLLIVRHHETIYTFLSSFLFDTQNTLTTHWIRHNEKYCLEPITLS 355

  Fly   360 -----ILNGDHSVFKEGAAEILNSYVEHREVVVPGFGEPDES----------------------- 396
                 .:|.|| ||.:...|..:|            .:.|:|                       
 Worm   356 SPTGEYVNEDH-VFFDFLLEAFDS------------SQADDSKAFYGLMLIYSMFQNNADVGELL 407

  Fly   397 -------LEQALDTVTGQSSSSSYALSEDSGVESSSPATTELDSQADAVEAEQIKLRNITDEEKQ 454
                   |:::..|...|.:.:...::..|.:...:.|.||:.  .:|.|.::| ..::.:|  |
 Worm   408 SAANFPVLKESTTTSLAQQNLARLRIASTSSISKRTRAITEIG--VEATEEDEI-FHDVPEE--Q 467

  Fly   455 LLQKSSSSTKADFAEMAKPFLDTVLHALDCTENDYLALLSLCLIYAMSHNRGIKNEWFEQVLAK- 518
            .|:                  |.|...|..|||..::......:.:.|.:|      |:..:.: 
 Worm   468 TLE------------------DLVDDVLVDTENSAISDPEPKNVESESRSR------FQSAVDEL 508

  Fly   519 ---STRGAFSYKTALIEHLLNIITQSSQPSSRIRLITVEIAL----ELLVTFTRPSSDDSRCITA 576
               ||.|.   ...|.:.|.:||.......:|||.||:|:|.    ::|:|.     ||.:..|:
 Worm   509 PPPSTSGC---DGRLFDALSSIIKAVGTDDNRIRPITLELACLVIRQILMTV-----DDEKVHTS 565

  Fly   577 AQQDLLFSARNQSMVVIRNFYKSEDIFLDLFEDEYNEMRKAQLNVEFLCMDSTILLPPTGTPLTG 641
            ..: |.|..|.:.:..|..:...|::||:.|||||.|.....:|.:.:  ...:||||..|||:.
 Worm   566 LTK-LCFEVRLKLLSSIGQYVNGENLFLEWFEDEYAEFEVNHVNFDII--GHEMLLPPAATPLSN 627

  Fly   642 INFTRRLPCGEVEKARRAIRVYFLLRRTCQKFLNEKESLLPLTNVVNL----VQVENVLDLNNSD 702
            :...:|||.|..|:.|..|..|..:|:..:....|.::.||: .|:|.    |.:.:.::|:|||
 Worm   628 LLLHKRLPSGFEERIRTQIVFYLHIRKLERDLTGEGDTELPV-RVLNSDQEPVAIGDCINLHNSD 691

  Fly   703 LIACTVV-------AKDSSKQRRFLVIDALQLILVEPDAKLLGWGVAKFVGFLQDVEVQGDKDDS 760
            |::||||       .|...:..||||.|.|||||||||::..||.:.:|||.|||..:.||..||
 Worm   692 LLSCTVVPQQLCSLGKPGDRLARFLVTDRLQLILVEPDSRKAGWAIVRFVGLLQDTTINGDSTDS 756

  Fly   761 RCLHITVH-RGGVTHNRTPLLSAKFLFDDHIRCMAAKQRLTKGRSKARQKKMYQIAQLIEIPGQM 824
            :.||:.|. :......|.|:|:|||:||||||||||||||||||..||..|:..|...:.:| ::
 Worm   757 KVLHVVVEGQPSRIKKRHPVLTAKFIFDDHIRCMAAKQRLTKGRQTARGLKLQAICSALGVP-RI 820

  Fly   825 DSPVYAVGGTMVAS------------SSGGSGNSSGSSSRSSHHRPMFSTANRVPGFAAVLR-GS 876
            |.      .||.:|            :.|....:..:||.||..||...:||        || .|
 Worm   821 DP------ATMTSSPRMNPFRIVKGCAPGSVRKTVSTSSSSSQGRPGHYSAN--------LRSAS 871

  Fly   877 NSAGVSRTQMAPNRSIEGIRNESAGRSRRRS 907
            .:||     |.|:..     .:.:..|.|||
 Worm   872 RNAG-----MIPDDP-----TQPSSSSERRS 892

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emaNP_650542.1 FPL 50..199 CDD:313053 102/148 (69%)
gop-1NP_498117.3 FPL 48..193 CDD:286801 101/147 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156334
Domainoid 1 1.000 206 1.000 Domainoid score I1704
eggNOG 1 0.900 - - E1_KOG2219
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H71019
Inparanoid 1 1.050 442 1.000 Inparanoid score I926
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52345
OrthoDB 1 1.010 - - D1319544at2759
OrthoFinder 1 1.000 - - FOG0006421
OrthoInspector 1 1.000 - - oto18453
orthoMCL 1 0.900 - - OOG6_103636
Panther 1 1.100 - - LDO PTHR21481
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5071
SonicParanoid 1 1.000 - - X4687
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

Return to query results.
Submit another query.