DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17565 and CDC43

DIOPT Version :9

Sequence 1:NP_650540.1 Gene:CG17565 / 41989 FlyBaseID:FBgn0038424 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_011360.1 Gene:CDC43 / 852722 SGDID:S000003123 Length:376 Species:Saccharomyces cerevisiae


Alignment Length:394 Identity:94/394 - (23%)
Similarity:154/394 - (39%) Gaps:98/394 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 TQIFRLEHQYYLDAMLRRLPSNYECLDSSRAWCVYWILQAAQLLSFNFD---------------- 106
            :::...:|:.:.:..|:.|||:::..|.:|...:::.:....:...|..                
Yeast     9 SRVVTKKHRKFFERHLQLLPSSHQGHDVNRMAIIFYSISGLSIFDVNVSAKYGDHLGWMRKHYIK 73

  Fly   107 ---DQTLNHVVQFLSNCRSPTGGFGGG------PGQYAHLAPTYAAVNSLCIIGSEQAYRAI-DR 161
               |.|.|.|:          .||.|.      .....:|..|..|:.|:.::...:.:..| |:
Yeast    74 TVLDDTENTVI----------SGFVGSLVMNIPHATTINLPNTLFALLSMIMLRDYEYFETILDK 128

  Fly   162 PTLVQFLFSVRDSD-GSFRLHVDGET---------DVRGAYCAIS------CAKLLNLPEPVIKE 210
            .:|.:|:...:..| |||...:|.:|         |:|..|.|::      |....:..|.:..|
Yeast   129 RSLARFVSKCQRPDRGSFVSCLDYKTNCGSSVDSDDLRFCYIAVAILYICGCRSKEDFDEYIDTE 193

  Fly   211 LFAGTGDWIAQCQTYEGGFGGAPGLEAHGGYTFCGIAGLALLNEADKCD---RQALLKWTLRRQ- 271
            ...|   :|...|.|.|.||...  |.|.|||.|.::.||||:..:|..   ::..:.|.|.|| 
Yeast   194 KLLG---YIMSQQCYNGAFGAHN--EPHSGYTSCALSTLALLSSLEKLSDKFKEDTITWLLHRQV 253

  Fly   272 -----MTYE------------GGFQGRTNKLVDGCYSFWVGATIPITQATLSGVDKQMEHTLFDV 319
                 |.:|            ||||||.||..|.||:||.     :....|...|.:|   |...
Yeast   254 SSHGCMKFESELNASYDQSDDGGFQGRENKFADTCYAFWC-----LNSLHLLTKDWKM---LCQT 310

  Fly   320 EALQEYILLCCQKQ-SGGLIDKPGKPQDLYHTCYTLSGVSIAQHSECASSPQVLGDTINELLPTH 383
            |.:..|:|...||. :||......:..||||:|...:.:::.:           |....||....
Yeast   311 ELVTNYLLDRTQKTLTGGFSKNDEEDADLYHSCLGSAALALIE-----------GKFNGELCIPQ 364

  Fly   384 PLFN 387
            .:||
Yeast   365 EIFN 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17565NP_650540.1 PLN02710 27..403 CDD:215380 94/394 (24%)
FTase 62..360 CDD:239223 89/361 (25%)
CDC43NP_011360.1 CAL1 1..376 CDD:227362 94/394 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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