DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17565 and RGTB2

DIOPT Version :9

Sequence 1:NP_650540.1 Gene:CG17565 / 41989 FlyBaseID:FBgn0038424 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_001327836.1 Gene:RGTB2 / 820381 AraportID:AT3G12070 Length:317 Species:Arabidopsis thaliana


Alignment Length:328 Identity:95/328 - (28%)
Similarity:156/328 - (47%) Gaps:31/328 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 QYYLDAMLRRLPSNYE--CLDSSRAWCVYWILQAAQLLSFNFDDQTLNHVVQFLSNCRSPTGGFG 128
            :|.|:.|..:...::|  .:|..|....||.|....||. .....:.:.||.::..|:..:|||.
plant    12 RYILNLMAEKKKESFESVVMDHLRMNGAYWGLTTLALLD-KLGSVSEDEVVSWVMTCQHESGGFA 75

  Fly   129 GGPGQYAHLAPTYAAVNSLCIIGSEQAYRAIDRPTLVQFLFSVRDSDGSFRLHVDGETDVRGAYC 193
            |..|...|:..|.:||..|.:.   .....:|...:..::..:::.||||...:.||.|.|.:|.
plant    76 GNTGHDPHVLYTLSAVQILALF---DKLNILDVEKVSNYIAGLQNEDGSFSGDIWGEVDTRFSYI 137

  Fly   194 AISCAKLLNLPEPV-IKELFAGTGDWIAQCQTYEGGFGGAPGLEAHGGYTFCGIAGLALLNEADK 257
            ||.|..:|...:.: :|:..    |:|..|:..:||||.:||.|:|.|..||.:..||:.....:
plant   138 AICCLSILKCLDKINVKKAV----DYIVSCKNLDGGFGCSPGAESHAGQIFCCVGALAITGNLHR 198

  Fly   258 CDRQALLKWTLRRQMTYEGGFQGRTNKLVDGCYSFWVGATIPITQATLSGVDKQMEHTLFDVEAL 322
            .|:..|..|...||....||..||..||.|.|||:||       .::|..:|:  .|.: :...|
plant   199 VDKDLLGWWLCERQDYESGGLNGRPEKLPDVCYSWWV-------LSSLIMIDR--VHWI-EKAKL 253

  Fly   323 QEYILLCCQKQSGGLIDKPGKPQDLYHTCYTLSGVSIAQHSECASSPQVLGDTINE--LLPTHPL 385
            .::||......:||:.|:|....|::||.:.::|:|:.::      |.|  .||:.  .||.|.:
plant   254 VKFILDSQDMDNGGISDRPSYTVDIFHTYFGVAGLSLLEY------PGV--KTIDPAYALPVHVI 310

  Fly   386 FNI 388
            ..|
plant   311 NRI 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17565NP_650540.1 PLN02710 27..403 CDD:215380 95/328 (29%)
FTase 62..360 CDD:239223 87/296 (29%)
RGTB2NP_001327836.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1042804at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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