DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17565 and Fntb

DIOPT Version :9

Sequence 1:NP_650540.1 Gene:CG17565 / 41989 FlyBaseID:FBgn0038424 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_742031.1 Gene:Fntb / 64511 RGDID:620119 Length:437 Species:Rattus norvegicus


Alignment Length:404 Identity:207/404 - (51%)
Similarity:259/404 - (64%) Gaps:22/404 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DEKVSTTTSREQQKTESSVEKCFD--RFEQIMFTDPRLTQIFRLEHQYYLDAMLRRLPSNYECLD 84
            |:.|.|.||.||.|.|..:::.|.  :|..::   |||. :.|.:|.:||...||:|...|||||
  Rat    37 DDSVETVTSIEQAKVEEKIQEVFSSYKFNHLV---PRLV-LQREKHFHYLKRGLRQLTDAYECLD 97

  Fly    85 SSRAWCVYWILQAAQLLSFNFDDQTLNHVVQFLSNCRSPTGGFGGGPGQYAHLAPTYAAVNSLCI 149
            :||.|..||||.:.:||...........|.|||..|:||.||||||||||.||||||||||:|||
  Rat    98 ASRPWLCYWILHSLELLDEPIPQIVATDVCQFLELCQSPDGGFGGGPGQYPHLAPTYAAVNALCI 162

  Fly   150 IGSEQAYRAIDRPTLVQFLFSVRDSDGSFRLHVDGETDVRGAYCAISCAKLLNLPEPVIKELFAG 214
            ||:|:||..|:|..|:|:|:|::..||||.:||.||.|||.||||.|.|.|.|:..|   :||.|
  Rat   163 IGTEEAYNVINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITP---DLFEG 224

  Fly   215 TGDWIAQCQTYEGGFGGAPGLEAHGGYTFCGIAGLALLNEADKCDRQALLKWTLRRQMTYEGGFQ 279
            |.:|||:||.:|||.||.||:||||||||||:|.|.:|.:....:.::||:|...|||.:|||||
  Rat   225 TAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQ 289

  Fly   280 GRTNKLVDGCYSFWVGATIPITQATLSGVDK---QMEHTLFDVEALQEYILLCCQKQSGGLIDKP 341
            ||.|||||||||||....:|:....|.....   .|.|.:|..:|||||||:|||..:|||:|||
  Rat   290 GRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKP 354

  Fly   342 GKPQDLYHTCYTLSGVSIAQH--SECASSPQVLGDTINELLPTHPLFNIPPKSVAAARSHFSNSN 404
            ||.:|.|||||.|||:|||||  |.......|:|...|.|.||||::||.|..|..|.:|     
  Rat   355 GKSRDFYHTCYCLSGLSIAQHFGSGAMLHDVVMGVPENVLQPTHPVYNIGPDKVIQATTH----- 414

  Fly   405 DTEFLGKDSPSKEE 418
               ||.|..|..||
  Rat   415 ---FLQKPVPGFEE 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17565NP_650540.1 PLN02710 27..403 CDD:215380 199/382 (52%)
FTase 62..360 CDD:239223 168/300 (56%)
FntbNP_742031.1 FTase 75..373 CDD:239223 168/300 (56%)
PFTB 1 123..164 30/40 (75%)
PFTB 2 174..215 23/40 (58%)
PFTB 3 222..263 27/40 (68%)
Farnesyl diphosphate binding 248..251 2/2 (100%)
PFTB 4 270..312 25/41 (61%)
Farnesyl diphosphate binding 291..294 1/2 (50%)
Farnesyl diphosphate binding 300..303 2/2 (100%)
PFTB 5 332..374 29/41 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334678
Domainoid 1 1.000 63 1.000 Domainoid score I10015
eggNOG 1 0.900 - - E1_COG5029
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1535
Inparanoid 1 1.050 401 1.000 Inparanoid score I1870
OMA 1 1.010 - - QHG54572
OrthoDB 1 1.010 - - D1042804at2759
OrthoFinder 1 1.000 - - FOG0004877
OrthoInspector 1 1.000 - - oto98007
orthoMCL 1 0.900 - - OOG6_101706
Panther 1 1.100 - - LDO PTHR11774
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3440
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

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