Protein Alignment CG17565 and Rabggtb

DIOPT Version :9

• Sequence 1: NP_650540.1
• Gene: CG17565 / 41989
• FlyBaseID: FBgn0038424
• Length: 419
• Species: Drosophila melanogaster
• Sequence 2: NP_619715.2
• Gene: Rabggtb / 25533
• RGDID: 3530
• Length: 331
• Species: Rattus norvegicus
• Alignment Length: 299
• Identity: 87/299 - (29%)
• Similarity: 143/299 - (47%)
• Gaps: 32/299 - (10%)

  Fly    91 VYWILQAAQLLSFNFDDQTLNHVVQFLSNCRSPTGGFGGGPGQYAHLAPTYAAVNSLCIIGSEQA 155
            |||.|....|:. .........::.|:.:|:...||.....|...||..|.:||..|.:..|
  Rat    50 VYWGLTVMDLMG-QLHRMNKEEILVFIKSCQHECGGVSASIGHDPHLLYTLSAVQILTLYDS--- 110

  Fly   156 YRAIDRPTLVQFLFSVRDSDGSFRLHVDGETDVRGAYCAISCAKLLNLPEPVIKELFAGTGDWIA 220
            ...|:...:|.::.|::..||||...:.||.|.|.::||::...||...:.:..|...   :::.
  Rat   111 IHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAI---EFVL 172

  Fly   221 QCQTYEGGFGGAPGLEAHGGYTFCGIAGLALLNEADKCDRQALLKWTLRRQMTYEGGFQGRTNKL 285
            .|..::||||..||.|:|.|..:|....||:.::..:.:...|..|...||:. .||..||..||
  Rat   173 SCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLP-SGGLNGRPEKL 236

  Fly   286 VDGCYSFWVGATIPITQATLSGVDKQMEHTLFDVEALQEYILLCCQKQSGGLIDKPGKPQDLYHT 350
            .|.|||:||.|::.|. ..|..:|:         |.|:.:||.|..:::||..|:||...|.:||
  Rat   237 PDVCYSWWVLASLKII-GRLHWIDR---------EKLRSFILACQDEETGGFADRPGDMVDPFHT 291

  Fly   351 CYTLSGVSIAQHSECASSPQVLGDTINELLPTHPLFNIP 389
            .:.::|:|:            ||:  .::.|..|:|.:|
  Rat   292 LFGIAGLSL------------LGE--EQIKPVSPVFCMP 316

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG17565	NP_650540.1	PLN02710	27..403	CDD:215380	87/299 (29%)
		FTase	62..360	CDD:239223	81/268 (30%)
Rabggtb	NP_619715.2	GGTase-II	18..301	CDD:239224	81/280 (29%)
		PFTB 1	20..61		5/10 (50%)
		PFTB 2	68..109		11/40 (28%)
		PFTB 3	116..157		13/40 (33%)
		PFTB 4	164..205		14/43 (33%)
		Geranylgeranyl diphosphate binding	190..192		1/1 (100%)
		PFTB 5	212..253		18/42 (43%)
		Geranylgeranyl diphosphate binding	232..244		7/11 (64%)
		PFTB 6	260..302		15/62 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5029
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1042804at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820