DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fntb and cpp1

DIOPT Version :10

Sequence 1:NP_650540.1 Gene:Fntb / 41989 FlyBaseID:FBgn0038424 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_594251.1 Gene:cpp1 / 2542380 PomBaseID:SPAC17G6.04C Length:382 Species:Schizosaccharomyces pombe


Alignment Length:362 Identity:150/362 - (41%)
Similarity:209/362 - (57%) Gaps:16/362 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 TQIFRLE-HQYYLDAMLRRLPSNYECLDSSRAWCVYWILQAAQLLSFNFDDQTLNHVVQFLSNCR 121
            :|.|.|: |..||..||..|||.:..||:||||.|||.|.:..:|. ..|.......:..:...:
pombe    26 SQSFNLQKHLKYLTKMLDPLPSPFTVLDASRAWMVYWELSSLAILG-KLDSSVCERAISSVRQLK 89

  Fly   122 SPTGGFGGGPGQYAHLAPTYAAVNSLCIIGSEQAYRAIDRPTLVQFLFSVRDSDGSFRLHVDGET 186
            .|:|||.||.||..||..|||::.|:|:..|..||..|:|..|..:|||:::.|||||::.:||:
pombe    90 GPSGGFCGGNGQDEHLLSTYASILSICLCDSTDAYSLIERDRLYDWLFSLKNPDGSFRVNNEGES 154

  Fly   187 DVRGAYCAISCAKL--LNLPEPVIKELFAGTGDWIAQCQTYEGGFGGAPGLEAHGGYTFCGIAGL 249
            |.|..|.|:..:.|  :::.:|    ||.||..|:.:|||||||..|.|..|||||||||.:|.:
pombe   155 DARSVYAAVCVSSLVGISMDDP----LFEGTLQWLCKCQTYEGGLSGVPYAEAHGGYTFCALAAI 215

  Fly   250 ALLNEADKCDRQALLKWTLRRQMTYEGGFQGRTNKLVDGCYSFWVGAT-IPITQATLSGVDKQME 313
            |||...|..:...|..|.::||.....||.||:|||||||||:||||: :.:.....|...|.:.
pombe   216 ALLGGLDNLNEIKLSTWLVQRQDPALYGFSGRSNKLVDGCYSWWVGASHVIVASGYGSASHKSLP 280

  Fly   314 HTLFDVEALQEYILLCCQKQSGGLIDKPGKPQDLYHTCYTLSGV-SIAQHSECASS------PQV 371
            :..::.|.|..|||.|||..||||.|||.|..|.|||||.|.|: |||......:|      |.:
pombe   281 NLFYNPEKLLGYILQCCQSTSGGLRDKPPKRPDQYHTCYCLLGLSSIAYDYRYHTSDGWSYKPSI 345

  Fly   372 LGDTINELLPTHPLFNIPPKSVAAARSHFSNSNDTEF 408
            |..:::.|||.||::.:|.......:|:|.:...::|
pombe   346 LHSSLSSLLPAHPIYCVPFGFEERIKSYFLSQESSKF 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FntbNP_650540.1 FTase 62..360 CDD:239223 134/302 (44%)
cpp1NP_594251.1 FTase 32..327 CDD:239223 132/299 (44%)

Return to query results.
Submit another query.