DRSC/TRiP Functional Genomics Resources

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Protein Alignment pad and IDD1

DIOPT Version :9

Sequence 1:NP_650534.2 Gene:pad / 41981 FlyBaseID:FBgn0038418 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_201474.1 Gene:IDD1 / 836806 AraportID:AT5G66730 Length:500 Species:Arabidopsis thaliana


Alignment Length:346 Identity:72/346 - (20%)
Similarity:112/346 - (32%) Gaps:113/346 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   586 PASLPAPAPTSNPAKLPMLNKQNITISRISMQTAPKAQSKPSTTSPTPASQPIP-VSVPALSQAQ 649
            |..|...:..|..|.:.....||:|         ||:..|.....|   ..|.| ..|.|||   
plant     2 PVDLDNSSTVSGDASVSSTGNQNLT---------PKSVGKKKRNLP---GMPDPDAEVIALS--- 51

  Fly   650 PPPLAAQHKKIVRKPPENQDTSGQKVKAARPPQQILPSPQQEGQNATHSGSEAPTTSGLICPTCK 714
            |..|.|                                                 |:..:|..|.
plant    52 PKTLMA-------------------------------------------------TNRFVCEICN 67

  Fly   715 REFKKKEHLTQHVKLHAGLRPFK---------------CSEEGC----------DKTFSRKEHLS 754
            :.|::.::|..|.:.|.  .|:|               |...||          |.|..:|....
plant    68 KGFQRDQNLQLHRRGHN--LPWKLRQRSTKEVRKKVYVCPVSGCVHHDPSRALGDLTGIKKHFCR 130

  Fly   755 RHLVSHSGQKMYTCEVCKKPFSRKDNLNKHRRIHTQTSTETLYCCDVCNKNFATKLHYEKHREMH 819
            :|     |:|.:.||.|.|.::.:.:...|.:|   ..|:. |.|| |...|:.:..:..||...
plant   131 KH-----GEKKWKCEKCSKKYAVQSDWKAHSKI---CGTKE-YKCD-CGTLFSRRDSFITHRAFC 185

  Fly   820 KKIRPESAAPGATASPAAAPALTHVRSNGQVPNKAVFEIKQERSAQQTQTQQP-----PAQVMHV 879
            ..:..|| |...|.|....|. |..|.|.::..|:...:  |.|.....:..|     ||..:.|
plant   186 DALAEES-AKNHTQSKKLYPE-TVTRKNPEIEQKSPAAV--ESSPSLPPSSPPSVAIAPAPAISV 246

  Fly   880 VT--TQDLAGNTITITQAPDS 898
            .|  .:.::.:.:.|..:|:|
plant   247 ETESVKIISSSVLPIQNSPES 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
padNP_650534.2 zf-AD 16..87 CDD:214871
C2H2 Zn finger 710..730 CDD:275368 5/19 (26%)
zf-C2H2 736..760 CDD:278523 8/48 (17%)
C2H2 Zn finger 738..760 CDD:275368 7/31 (23%)
zf-H2C2_2 752..777 CDD:290200 7/24 (29%)
zf-C2H2 766..788 CDD:278523 5/21 (24%)
C2H2 Zn finger 768..788 CDD:275368 5/19 (26%)
zf-H2C2_2 780..808 CDD:290200 8/27 (30%)
C2H2 Zn finger 799..819 CDD:275368 6/19 (32%)
IDD1NP_201474.1 C2H2 Zn finger 63..83 CDD:275368 5/19 (26%)
C2H2 Zn finger 104..132 CDD:275368 6/27 (22%)
C2H2 Zn finger 139..158 CDD:275368 5/18 (28%)
C2H2 Zn finger 166..182 CDD:275368 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 44 1.000 Inparanoid score I2683
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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